Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_01677 |
Symbol | |
ID | 6306640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 3215531 |
End bp | 3216175 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642640394 |
Product | hemolysin III |
Protein accession | YP_001914251 |
Protein GI | 188577322 |
COG category | [R] General function prediction only |
COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.588653 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGCAG ACGCCTCCCC CTCGACCGAC CTGCGCGACG AAATTGCCAG TGCCGTGACC CACGGCCTGG GCGCCATTGC CGCATTGGCT GGCGGTTCGG TGCTGATCAC GCTGGCCGCC ATCCATGGCG ATGGCTGGCA ATTGGCCACC GCCATCGTGT TCAGTGCCAC GCTGGTACTG CTTTACGTCG CCTCCACGCT GTTCCATGCC ATTGCGCATC CAGGCGCCAA GGCGCGTCTG CAGGTGCTCG ATCACTGCGC AATCTATCTA TTGATCGCCG GCACCTATAC CCCGTTCACG CTGATCAACC TGCGTGGCCC CTGGGGCTGG GGATTGTTTG CGGCCGTCTG GACGATCGCC GCCGCCGGAG TGATCTTCAA GATGTTTTTT ACCGGTCGCT TTCGCTTGCT GTCGACGGTG CTGTATTTGG CAATGGGCTG GCTGATCATC GTGGCGATCC AGCCGTTGCT GCGCTCCGTC GATACCTGGT CGCTGTACTG GCTGTTGGCA GGCGGTCTTT TCTACACGCT GGGCACGTAT TTCTATCAAC GCGACAACCA GCGTTATTTC CACGCGATCT GGCACCTGTT CGTGCTCGCC GGTAGCACTT GCCACTTCGT TGCCGTCATC GCGCAGGTGA TGTGA
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Protein sequence | MNADASPSTD LRDEIASAVT HGLGAIAALA GGSVLITLAA IHGDGWQLAT AIVFSATLVL LYVASTLFHA IAHPGAKARL QVLDHCAIYL LIAGTYTPFT LINLRGPWGW GLFAAVWTIA AAGVIFKMFF TGRFRLLSTV LYLAMGWLII VAIQPLLRSV DTWSLYWLLA GGLFYTLGTY FYQRDNQRYF HAIWHLFVLA GSTCHFVAVI AQVM
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