Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_01660 |
Symbol | |
ID | 6306657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 3233041 |
End bp | 3234384 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642640411 |
Product | beta-lactamase |
Protein accession | YP_001914268 |
Protein GI | 188577339 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.142612 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCCATCG GGCTGTTCGG GGCATTATTG CCTCTGGCTC TCTCTTCCAC CGCGCAGACA CCCGCGCCTA CCGCCGCTGC GCTGCAGCCG GCCAGGGTTG CGCAGTCGTC CACCGCACCG CTGCCCTACC GCACCTCGCT GCCGGCCAAC CAAGTGTTGG CACCTGCTGC CGGCTTCGAC GTGGCGGCAT TCGAATCGAT GGCGGACCAG TTGACCTACG GCAACCGCGT GCCCGGCATG GCGATGGCCA TCGTGCAGGG CGGCAAGGTG CTCAGCGCGC GCGGCTATGG CGTTACCGAC GTCAATCATC CGCAGCCGGT CGATGGCCAC ACCGTGTTTC GTTTGGCATC GCTGTCCAAG GCCTTCGCCG GCACCATGGC CGGCCTGCTG GTCAACGATG GCGTGCTGCG CTGGGACAGC AAGGTGGTCG ACTACGTGCC GGGCTTCCAG CTCAGCGATG GCGCCGCAAC GCGCCAGCTC ACCGTCGCCG AAGTGCTCAG CCATCGCGTC GGCCTGACTC GTAATGCCTA CGACCGCGAT ATCGAATCCA ACGTCGACTA CTACTCGCTC AGCCACAAAC TCGCGGTCGC ACCGCTGCGC TGCGCGCCGG GCGATTGCTA CGCATATCAG AACGTGGCCT TCAGCCTGGT GGGCGATGTA GTGTTCGCCG CGTCAGGCAG CTTCTACGAG CAATTGGTGG AACGCCGCAT CTTCAAGCCG CTGGGCATGA ACGATGCGAG CCTGGGTCTG GCCGGCATCC AGGCCAGTCC GCACTGGGCA CGCCCGCACG TGCGCAGCCG CAATGGCTGG GTGTCGCTGA CGCCCAAGCC GACCTATTAC CGTCTGGCGC CCGCTGCGGG CGTCAACGCC AGCGCCAGCG ATATGGCGCA GTGGCTGCTC GCACACACCG GTCATCGCAC CGACGTGCTG CCTGCACCGC TGCTGGCGAC CCTGCACGCG CCAGTGATCT CCACGCCGGG CGAAATGCGT TCCGGCTGGC GCCACGAGCG TGTGGATGCG GCGAGCTACG CGCTGGGCTG GCGTGTGTTC GACTACGCCG GTCATCAGGT GGTGTTCCAT GCCGGTGCGG TGCAGGGCTA CCGCGGCTTG GTGGCGCTGC TGCCAGAGCG CGATCTGGGA ATTGCGATCC TGTGGAACGG CGAGAGTGGC CTGCCCTCAG GCATGCTGCC GACTATCCTG GACCGCGCAC TGGGCTTGCC GGCGAAGCGT TGGTTGGACA TCGATGTGGA CGGCGACTTC GGCAGCGAGA ACATGCTGGC AGAGAAGCCC GACCCGGCTG GCAAGGGCGC GTCTTCCAGC AAGTCGGTGG CATCACCGCG CTGA
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Protein sequence | MAIGLFGALL PLALSSTAQT PAPTAAALQP ARVAQSSTAP LPYRTSLPAN QVLAPAAGFD VAAFESMADQ LTYGNRVPGM AMAIVQGGKV LSARGYGVTD VNHPQPVDGH TVFRLASLSK AFAGTMAGLL VNDGVLRWDS KVVDYVPGFQ LSDGAATRQL TVAEVLSHRV GLTRNAYDRD IESNVDYYSL SHKLAVAPLR CAPGDCYAYQ NVAFSLVGDV VFAASGSFYE QLVERRIFKP LGMNDASLGL AGIQASPHWA RPHVRSRNGW VSLTPKPTYY RLAPAAGVNA SASDMAQWLL AHTGHRTDVL PAPLLATLHA PVISTPGEMR SGWRHERVDA ASYALGWRVF DYAGHQVVFH AGAVQGYRGL VALLPERDLG IAILWNGESG LPSGMLPTIL DRALGLPAKR WLDIDVDGDF GSENMLAEKP DPAGKGASSS KSVASPR
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