Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_01653 |
Symbol | |
ID | 6306663 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 3238567 |
End bp | 3239001 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642640416 |
Product | nodulation protein nfed, C-terminal only |
Protein accession | YP_001914273 |
Protein GI | 188577344 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1585] Membrane protein implicated in regulation of membrane protease activity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCTGGG ATGTGGCGGT CTGGGCAGTG CTGGCGCTGC TGCTGATTGC GGCCGAGACC TTGGTGCCGG GTGCCTTCCT GCTGTGGATG GGGATCGCTG CCGCAGTGGT GTGCGTGTTG GTGCTGGTGT TGCCGGACAT CGCGTTGCTG GTGCAGATCG TGGCGTTCGT GGTGCTCAGC TTCGTCTCGG TGCAGGTGTA TCGCACCTGG TGTCGCGGCA AGGGCCGTGA GAGTGATCGC CCGTTGCTCA ATCGACGTGC CGAGCAGTTG ATCGGCCGTC GCGTGTTGCT CGATCAGGCC ATCGACGATG GTCGCGGGCG CGTCAAGGTC GACGATGCGT TCTGGGTGGT CGCCGGTCCC GATCTGCCGG CCGGCACGCC GGTGCGCATC GTCGGTGTCG ATGGCATGAC CTTGCTGGTG CAGCCGGTCA GCTGA
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Protein sequence | MRWDVAVWAV LALLLIAAET LVPGAFLLWM GIAAAVVCVL VLVLPDIALL VQIVAFVVLS FVSVQVYRTW CRGKGRESDR PLLNRRAEQL IGRRVLLDQA IDDGRGRVKV DDAFWVVAGP DLPAGTPVRI VGVDGMTLLV QPVS
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