Gene PXO_01653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_01653 
Symbol 
ID6306663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp3238567 
End bp3239001 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content66% 
IMG OID642640416 
Productnodulation protein nfed, C-terminal only 
Protein accessionYP_001914273 
Protein GI188577344 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1585] Membrane protein implicated in regulation of membrane protease activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCTGGG ATGTGGCGGT CTGGGCAGTG CTGGCGCTGC TGCTGATTGC GGCCGAGACC 
TTGGTGCCGG GTGCCTTCCT GCTGTGGATG GGGATCGCTG CCGCAGTGGT GTGCGTGTTG
GTGCTGGTGT TGCCGGACAT CGCGTTGCTG GTGCAGATCG TGGCGTTCGT GGTGCTCAGC
TTCGTCTCGG TGCAGGTGTA TCGCACCTGG TGTCGCGGCA AGGGCCGTGA GAGTGATCGC
CCGTTGCTCA ATCGACGTGC CGAGCAGTTG ATCGGCCGTC GCGTGTTGCT CGATCAGGCC
ATCGACGATG GTCGCGGGCG CGTCAAGGTC GACGATGCGT TCTGGGTGGT CGCCGGTCCC
GATCTGCCGG CCGGCACGCC GGTGCGCATC GTCGGTGTCG ATGGCATGAC CTTGCTGGTG
CAGCCGGTCA GCTGA
 
Protein sequence
MRWDVAVWAV LALLLIAAET LVPGAFLLWM GIAAAVVCVL VLVLPDIALL VQIVAFVVLS 
FVSVQVYRTW CRGKGRESDR PLLNRRAEQL IGRRVLLDQA IDDGRGRVKV DDAFWVVAGP
DLPAGTPVRI VGVDGMTLLV QPVS