Gene PXO_01646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_01646 
Symbol 
ID6306670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp3244660 
End bp3245394 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content69% 
IMG OID642640423 
Product16S ribosomal RNA methyltransferase RsmE 
Protein accessionYP_001914280 
Protein GI229358034 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCTGA CCCGCTCCCA CGTCGCGTTA CCACTGCACT GCGACCAGGA AGTGGCGCTG 
CCGGAAGAAT CCGCCAATCA CCTGCTGCGC GTGCTACGGC TGCGCCAGGG CGATGCCTGC
ATCCTGTTCA ACGGCGACGG CAGCGACTAC CACGCGCGCA TCACGGTGGC GGGCAAGCGC
GACGCACGTG CGCTGGTCGA ACGCGTGGAA CCGCTCTCCA ACGAATCGCC GCTGCGGATC
ACCTTGATGC AAGGCATCGC ACGCGGCGAG AAGATGGATC TGATCCTGCA GAAAACCACC
GAGTTGGGCG TTGCGGCGAT CGTGCCGGTG ATTGCCGAGC GCACCGAGGT GAAGCTCGAC
GCCGCGCGCA CGGAAAAACG CGTGGCGCAC TGGCGCAGCG TGGTGGTCTC GGCTTGCGAG
CAATCCGGGC GTGCACGTCT TCCCAGCGTG GCCACGCCGC TGGGTCTGCA GGACGCGGCG
CAGGCCAGCG ACACGCACGC GCTACGGCTG ACCCTGGACC CGCAGGGCGA GCATCGCCTG
GGCACGTTGG CATCGAGCAT CCCGCAACAC ATTGTCGTGG CGATCGGGCC GGAAGGCGGC
TGGTCGCCAC GCGATCGCGC CACCCTCGCC GAGGCCGGTT TCAGCGGCCT GCAGCTAGGG
CCGCGCATTC TGCGCACCGA AACGGCGGGG CTGGCGGCGA TTGCGGCGCT GCAGTCGCGG
TTCGGGGACC TGTAG
 
Protein sequence
MRLTRSHVAL PLHCDQEVAL PEESANHLLR VLRLRQGDAC ILFNGDGSDY HARITVAGKR 
DARALVERVE PLSNESPLRI TLMQGIARGE KMDLILQKTT ELGVAAIVPV IAERTEVKLD
AARTEKRVAH WRSVVVSACE QSGRARLPSV ATPLGLQDAA QASDTHALRL TLDPQGEHRL
GTLASSIPQH IVVAIGPEGG WSPRDRATLA EAGFSGLQLG PRILRTETAG LAAIAALQSR
FGDL