| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_01644 |
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| Symbol | |
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| ID | 6306672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 3247479 |
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| End bp | 3250106 |
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| Gene Length | 2628 bp |
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| Protein Length | 875 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642640425 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001914282 |
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| Protein GI | 188577353 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.278221 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGCCG GACAAGAACA ACAAGCCCCA GCCAGCACGC CGTCGGCCAC CACCGAGCTG
GACACCATCA CCGTCACCGG CTACCGCGCA TCGCTGGAGA AGAGCCAGTC GGTCAAGCGT
GCGGCCAACT CCATCGTCGA TGCGATCAGC GCCGAAGACA TCGGCAAGTT CCCGGACACC
AATGCAGCCG AATCGCTGGC GCATGTTCCG GGTATCAGCG TCGACCGCCA GTTCGGCGAA
GGCGAAAAGG TCAGCATCAA CGGCACCGAC CCGGCACTGA ACCGTGTGCT GCTCAACGGC
CAGACCATCG CTTCCGGCGA CTGGGGCGGC AATCCCAGCG ACACCAGCGG CCGCACCTTC
AACTACACCC TGCTGTCGCC GGAAATCATC GGCCTGATGG AGGTCTACAA GACCCCAGAA
GCGCGTATCG ACGAAGGCTC GATCGGCGGC ACCGTGATCG TGCATACCCG CAAGCCGCTG
GATCTGCCCA AGAACACCAT CCGCGGCTCG GTTGGCTACA ACTACAACAA CCGCTCGAAA
GAAGGTAACC CGCGTGGTTC GGCCTTGTGG AGCTGGAAGA ACGACGACGA AACCTTCGGC
GCGTTGATTT CGGCCACGCA CGACAAGCAG GACCTGGCGC GCGCCGGTAT CGAATACTTC
GGCTATACCA CCGGCGACAA GATTCCGCCG ACCGCCACGA TCACTGGCGA CGGCAGCAAC
GTCGCCACCG CACGCGTCCC GGCCGGCATC AGCAGCGCGT TCTTCCAGCA AACCCGCGAG
CGCAACGGCT TGCAGGGCGC GTTGCAGTGG AAGCCGGACG AGAACAACGA ATTCAATCTG
ACCGGCATCT ACATCAAGGG TAAATACAAC AACTACAGCC AGGCGCGCTA CGTGTGCCCG
GCCTGCAACG ACGATCTGAA AAAAGTGACC CGCGCCAATG TGGAGAACGG CGTGGTCACC
TCGGCCACGG TGTCCGACAA CACGCAGGGC GGCGTCAATG ACCAGCCGTA TGCGCAGATG
GACACCAACT ACCGCGAGAG CACCGTCACC ACCAAGAGCC TGAACCTGCG GCACGACTGG
TCGGGCGAGA AGTGGGTGTT CACCACCCAG ATCGGCGATA CCGAGGCCAC CGGCGGCAAG
AACCCCGAAT ACCTGATGAA GTATCTGATG CAGGATGGCG GGTACAACTA TGCCTTCGAC
GGCCGCAATA CCGCGGTGAA CTACGACAAC GGCGGCGCGG CCAACTGGGC GCTTCCGGGC
AATCCGGCCG GACTGGCTCC TGGCGCTGAG ACGATTCCAG GCACGTCGCC GTCGGTCAGC
CCCATGCAAG CTGGCGGTAT TTACTACCAG AAGAGCAAGG ACCAGGAAAA ATACTTCCAG
TGGGATGCGT CGCGCGATCT GGCGCTGGGC CCGTTCAACA AGCTGCAGTT CGGCTACAAG
TACATCAATC ACGACAATGG CGTGGACGCA CGCGGCAACC GCATCAACAC CACCGACCCG
GTTTCATTGA CGCAGTTCAA CCCCGGTACG ACGCAGAGCA GCCTGTACGA CGGCCTGGGC
GCCAGCGGCG ATCTGACCAC GTGGCCGACC GCCAACCTGG GCGCCGTGCG CCGTTATCTG
CTGGCGCAGC CGCAAGGTCC CTACAACACC GATTTCGGTG GCTCGTTCGA CGTTAAAGAG
ATTACCCAGA ACGTCTACAC GCAGTTGAAT TTCGAATCCG GCCAGTGGCG CGGTAATGTC
GGCGTCCGCC TGCTCGATAC GACCGACAAG TCCGAGTATT GGCAAAGCCC CGACAATGGT
CAGAGCTACT CTCGCGTTGC CGAGACGCAT GAGTACCGCA AAGCGCTGCC GAGCTTCAAC
GTGGCCTACG ACGTGACCGA CGATGCCGTG CTGCGCTTCT CGGTCGCCAA GGTCATGGCA
CGTCCACGTT ATGCCGATCT TGCCGGGTCG TTCACCGTCA ACAGCGGCAA CGGCAATCTG
ACTGCCAGCG GCGGTAATCC GGACCTGAAA CCATACGAGT CGACCAACTA CGACCTGGCC
GCCGAGTGGT ATTTCGCACC GTCGAGCATG TTGTCGGGTG AGGTGTTCTA TCGCGACATC
AGCTCGTACA TCGTCAGCAC CACCGTGGGT GAGCAACGTC CGGCAACTAA CTTGAACCCA
GCTGGTCTTT ATCAGGTAAC TACCCCCACC AACGCGTCCG ACGCCAAGGT CAAGGGCGCA
TCGATCAACT ACCAGCAGAC CTTCGGCCTG GGCTTCGGCT TGCAGGCGAA CTACACCTAT
GCCAAGGCCG ACGCCAGCAC CGGTTTGAAC CTGCCCTACC TGTCGCGCGA CACCTACAAC
GTGATCCCGT ACTGGGAACA TGGCGACTGG ACGGTGCGCG TCAACTACAG CTACCGCTCC
AAGTACTTCA CCCAGCTCGG GCGGCTGGCA TCGGAAGACT TCGCAGACAG CTACAAGCAG
CTGGATCTGA CCGCCTCGTA TCAGATCACC GATTACATGG GTCTCACCTT CGGCGCCACC
AACCTGCTGG ATTCCACGTA TAAGTTGTAC AGCGGAACCA GGGACACCCC GACGGCGTTC
TACAAGAACG GCCGCGGCTA CCAGGCCCAG CTGAACTTCA AGTTCTGA
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| Protein sequence | MAAGQEQQAP ASTPSATTEL DTITVTGYRA SLEKSQSVKR AANSIVDAIS AEDIGKFPDT
NAAESLAHVP GISVDRQFGE GEKVSINGTD PALNRVLLNG QTIASGDWGG NPSDTSGRTF
NYTLLSPEII GLMEVYKTPE ARIDEGSIGG TVIVHTRKPL DLPKNTIRGS VGYNYNNRSK
EGNPRGSALW SWKNDDETFG ALISATHDKQ DLARAGIEYF GYTTGDKIPP TATITGDGSN
VATARVPAGI SSAFFQQTRE RNGLQGALQW KPDENNEFNL TGIYIKGKYN NYSQARYVCP
ACNDDLKKVT RANVENGVVT SATVSDNTQG GVNDQPYAQM DTNYRESTVT TKSLNLRHDW
SGEKWVFTTQ IGDTEATGGK NPEYLMKYLM QDGGYNYAFD GRNTAVNYDN GGAANWALPG
NPAGLAPGAE TIPGTSPSVS PMQAGGIYYQ KSKDQEKYFQ WDASRDLALG PFNKLQFGYK
YINHDNGVDA RGNRINTTDP VSLTQFNPGT TQSSLYDGLG ASGDLTTWPT ANLGAVRRYL
LAQPQGPYNT DFGGSFDVKE ITQNVYTQLN FESGQWRGNV GVRLLDTTDK SEYWQSPDNG
QSYSRVAETH EYRKALPSFN VAYDVTDDAV LRFSVAKVMA RPRYADLAGS FTVNSGNGNL
TASGGNPDLK PYESTNYDLA AEWYFAPSSM LSGEVFYRDI SSYIVSTTVG EQRPATNLNP
AGLYQVTTPT NASDAKVKGA SINYQQTFGL GFGLQANYTY AKADASTGLN LPYLSRDTYN
VIPYWEHGDW TVRVNYSYRS KYFTQLGRLA SEDFADSYKQ LDLTASYQIT DYMGLTFGAT
NLLDSTYKLY SGTRDTPTAF YKNGRGYQAQ LNFKF
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