Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_01642 |
Symbol | |
ID | 6306674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 3252039 |
End bp | 3253070 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642640427 |
Product | glycosyl hydrolase, family 18 |
Protein accession | YP_001914284 |
Protein GI | 188577355 |
COG category | [R] General function prediction only |
COG ID | [COG3858] Predicted glycosyl hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.107746 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTTGCGC TGGCATTTGC CTGCGCCCCG GCCCTGGCCA AAAATCCCAC GGCGTTGTTC TATCTGATGA ACACGCAGAA ATCGACCAAC TCGTTCATTG CCAACATCGA CAAGATCGAT GTGGTGGTGC CCACCTGGTA CGGCGTGGAC CAGAATGGCC TGGTCAACGG CACTCCCAAC ATGTATCTGT ACGACATCGC CAAGCAGCAC AAGCTGCGGG TGATGCCGAT CCTGTCGATG ACCACCGGTC GCGAAGGATT CCACAAGCTG ATGCATGACG AAGCCGCCAA GAAGCGCATG ATCGAATCGC TGCTGATTCA CGGCAAGCAG CACAAGTACT ACGGCTTCCA GTTCGATTTC GAAAACATCG CCTGGACCGA CCGCGACGCT TACACGCTGA TGGTCAAGCA GACCGCCGAC GCGCTGCACA AGGCCGGCTT CAAGATGTCG GTCGCCGTGG TGCCGAATGC ACCGGGCTAT GCCGAAGGCG GCCAGTTTTC CAAGTGGATG TGGGAATACT GGCGTGGTGC GTACGACCTG AAGGCGCTGG GCCAGGCGGT GGATCTGGTC AGCCTGATGA CCTACGACCA GCACACCCGC TGGACCACGC CCGGCCCGGT CGATGGCATG GTGTGGATGA AGAAGCATCT GGATTACGCC ATCACCCAGG TGCCGAAAGA CAAGCTCTCG CTGGGTATCG CCACCTACGG CTACCGCTGG TACACCGGCA ACCCGGTGAA GGAAGACGGC ACCGAGGCGT CGAATATTTC GGCAACGTAT ATCGATGCGG ACGAGTCTTT CCCGCTGGCG CTGGAACAGA ACGCCACCGT GCAGTGGGAT CCGGTCGAGC AGGAATCGTG GTTCTACTTC TATCGCGACG ACATGCGCGA GTGGGTGTTC CGCCCGGACG CACGCAGCTT CAAGGCGCGC TACGAGCTGA CCAAGCAGTA CGGCCTGGAA GGTTTCAGCT GCTGGGTGCT GGGCGCCGAA GACCCGAAGG TGTGGGACGA GTTGCCGACT GCGCAGCGCT AA
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Protein sequence | MLALAFACAP ALAKNPTALF YLMNTQKSTN SFIANIDKID VVVPTWYGVD QNGLVNGTPN MYLYDIAKQH KLRVMPILSM TTGREGFHKL MHDEAAKKRM IESLLIHGKQ HKYYGFQFDF ENIAWTDRDA YTLMVKQTAD ALHKAGFKMS VAVVPNAPGY AEGGQFSKWM WEYWRGAYDL KALGQAVDLV SLMTYDQHTR WTTPGPVDGM VWMKKHLDYA ITQVPKDKLS LGIATYGYRW YTGNPVKEDG TEASNISATY IDADESFPLA LEQNATVQWD PVEQESWFYF YRDDMREWVF RPDARSFKAR YELTKQYGLE GFSCWVLGAE DPKVWDELPT AQR
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