Gene PXO_01617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_01617 
Symbol 
ID6306696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp3287341 
End bp3288483 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content63% 
IMG OID642640449 
ProductISXo2 putative transposase 
Protein accessionYP_001914306 
Protein GI188577377 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.6149 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGACAATG CCCCCAGCTC AAGGCAACGG AGGTGGGAGA TGGGCATCAA TCTCGTGCAG 
TTTCAGCCAG GCTTGTCGCT GAGCGAGTTC ATGGATCGCT ACGGAACCGA AGCCAAGTGT
TACCGGGCGT TGTATCGGTG GCGCTGGCCG AAGGGATTTC GCTGCCCGCA GTGCGACGGC
CGCGCGCGCT CGCGCTTTCG ACGCGCTGAT CAGGTCTACT ACCAGTGCCG GGCGTGCCGG
CATCAAACCA CCTTGCGTGC CGGCACGCTG TTGCAATCGA GCAAGCTGTC TTTGCGCCTG
TGGATGCAGG CGATGTACCT GTTGACCTCC AGCAAGACCA ACCTGGCAGC ACTGGAGTTG
AAGCGGCATC TTGGGGTGAC CTACAAGGCG GCCTGGCGCA TGAAGCACAA GATCATGCAG
GCGATGACCG AGCGCGAAGA ACCGCGAAAA CTCAAGGGAT TCGTGCAGAT CGATGACGCG
TATCTGGGCG GTGAGCGCAG CGGCGGCAAG CGCGGACGAG GTTCGGAGAA CAAACAGCCG
TTCGTGATCG CGGTGCAAGT GGACCACACC CACGAACACC CCGTCTTTGC GGTGATCGAG
CCGGTGAAGG CCTTTGACAA CGCCTCGCTG GAGGACTGGA TCGCGCGCCG TCTGGAGCCG
GAGTGTGAGG TCTATAAGCG ACGGCCTGGC ATGCTTTCGC CGTCTGGAGG AGGCCGGGCA
TGCGCACACC ACGCTCGATA CCGGCGGCGG TCGTGCTGCA ACCGACGTCC AGGGAGCACG
TTGGTTGAAT GTGGTGCTGG GCAATGTCAA ACGCGCCATC AGCGGGACCT ACCATGCGGT
GGGCCAGGCC AAGTATGCAA GGCGCTACCT GGCCGAGGCG GCCTATCGCT TCAACCGCCG
ATTCGACCTG AAACAGATGC TGCCGCGGCT GGCGACGGCG CTGCTGCGCG GCACACCTTG
CCCAGAGCGC GTTTTGCGTA TGGCAAGCAA CTTCCATGGC TGAGGGATGG GGCTAATCAG
GAATTTTTTT CGTCGGCCAT GCGTGCGCCG CGGCAATGCA GCTGGACCAT CGCTCGTAGC
CTTGTCGTGA GAGGCGTCGG TCCCTTCTCC CACCGGGAGA AGGTGGCGCG CAGCGCCGGA
TGA
 
Protein sequence
MDNAPSSRQR RWEMGINLVQ FQPGLSLSEF MDRYGTEAKC YRALYRWRWP KGFRCPQCDG 
RARSRFRRAD QVYYQCRACR HQTTLRAGTL LQSSKLSLRL WMQAMYLLTS SKTNLAALEL
KRHLGVTYKA AWRMKHKIMQ AMTEREEPRK LKGFVQIDDA YLGGERSGGK RGRGSENKQP
FVIAVQVDHT HEHPVFAVIE PVKAFDNASL EDWIARRLEP ECEVYKRRPG MLSPSGGGRA
CAHHARYRRR SCCNRRPGST LVECGAGQCQ TRHQRDLPCG GPGQVCKALP GRGGLSLQPP
IRPETDAAAA GDGAAARHTL PRARFAYGKQ LPWLRDGANQ EFFSSAMRAP RQCSWTIARS
LVVRGVGPFS HREKVARSAG