Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_01617 |
Symbol | |
ID | 6306696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 3287341 |
End bp | 3288483 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642640449 |
Product | ISXo2 putative transposase |
Protein accession | YP_001914306 |
Protein GI | 188577377 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.6149 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGGACAATG CCCCCAGCTC AAGGCAACGG AGGTGGGAGA TGGGCATCAA TCTCGTGCAG TTTCAGCCAG GCTTGTCGCT GAGCGAGTTC ATGGATCGCT ACGGAACCGA AGCCAAGTGT TACCGGGCGT TGTATCGGTG GCGCTGGCCG AAGGGATTTC GCTGCCCGCA GTGCGACGGC CGCGCGCGCT CGCGCTTTCG ACGCGCTGAT CAGGTCTACT ACCAGTGCCG GGCGTGCCGG CATCAAACCA CCTTGCGTGC CGGCACGCTG TTGCAATCGA GCAAGCTGTC TTTGCGCCTG TGGATGCAGG CGATGTACCT GTTGACCTCC AGCAAGACCA ACCTGGCAGC ACTGGAGTTG AAGCGGCATC TTGGGGTGAC CTACAAGGCG GCCTGGCGCA TGAAGCACAA GATCATGCAG GCGATGACCG AGCGCGAAGA ACCGCGAAAA CTCAAGGGAT TCGTGCAGAT CGATGACGCG TATCTGGGCG GTGAGCGCAG CGGCGGCAAG CGCGGACGAG GTTCGGAGAA CAAACAGCCG TTCGTGATCG CGGTGCAAGT GGACCACACC CACGAACACC CCGTCTTTGC GGTGATCGAG CCGGTGAAGG CCTTTGACAA CGCCTCGCTG GAGGACTGGA TCGCGCGCCG TCTGGAGCCG GAGTGTGAGG TCTATAAGCG ACGGCCTGGC ATGCTTTCGC CGTCTGGAGG AGGCCGGGCA TGCGCACACC ACGCTCGATA CCGGCGGCGG TCGTGCTGCA ACCGACGTCC AGGGAGCACG TTGGTTGAAT GTGGTGCTGG GCAATGTCAA ACGCGCCATC AGCGGGACCT ACCATGCGGT GGGCCAGGCC AAGTATGCAA GGCGCTACCT GGCCGAGGCG GCCTATCGCT TCAACCGCCG ATTCGACCTG AAACAGATGC TGCCGCGGCT GGCGACGGCG CTGCTGCGCG GCACACCTTG CCCAGAGCGC GTTTTGCGTA TGGCAAGCAA CTTCCATGGC TGAGGGATGG GGCTAATCAG GAATTTTTTT CGTCGGCCAT GCGTGCGCCG CGGCAATGCA GCTGGACCAT CGCTCGTAGC CTTGTCGTGA GAGGCGTCGG TCCCTTCTCC CACCGGGAGA AGGTGGCGCG CAGCGCCGGA TGA
|
Protein sequence | MDNAPSSRQR RWEMGINLVQ FQPGLSLSEF MDRYGTEAKC YRALYRWRWP KGFRCPQCDG RARSRFRRAD QVYYQCRACR HQTTLRAGTL LQSSKLSLRL WMQAMYLLTS SKTNLAALEL KRHLGVTYKA AWRMKHKIMQ AMTEREEPRK LKGFVQIDDA YLGGERSGGK RGRGSENKQP FVIAVQVDHT HEHPVFAVIE PVKAFDNASL EDWIARRLEP ECEVYKRRPG MLSPSGGGRA CAHHARYRRR SCCNRRPGST LVECGAGQCQ TRHQRDLPCG GPGQVCKALP GRGGLSLQPP IRPETDAAAA GDGAAARHTL PRARFAYGKQ LPWLRDGANQ EFFSSAMRAP RQCSWTIARS LVVRGVGPFS HREKVARSAG
|
| |