Gene PXO_01597 details

Gene Information

• Locus tag: PXO_01597
• ID: 6306715
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: -
• Start bp: 3311291
• End bp: 3313318
• Gene Length: 2028 bp
• Protein Length: 675 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 642640468
• Product: ATP-dependent helicase
• Protein accession: YP_001914325
• Protein GI: 188577396
• COG category: [K] Transcription; [L] Replication, recombination and repair
• COG ID: [COG1199] Rad3-related DNA helicases

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCCAAC TTGCCACTGT CAGCATCGAA GCGCTCAGCG AGGGTGGGGC GCTTGCGCGT 
CAGCTCGACG CCTTCGCGCC ACGTGCTGCG CAGTTGCGCC TGACCGGAGC GATTGCCGAG 
GCATTCGAGC AGCGCGATGT GTTGCTGGCA GAGGCCGGCA CCGGCACCGG CAAGACCTAC 
GCCTATCTGG TGCCGGCGCT GCTGTCCGGG CTCAAGACCA TCGTTTCCAC CGGCACGCGC 
GCGCTGCAGG ATCAGCTGTT CCATCGCGAT CTGCCGCGCG TGCGCGCCGC GCTGGGCGTG 
GGCCTGCGTA GCGCGTTGCT GAAGGGCCGC GCCAACTATC TGTGCAAGTA CCGCACCCAG 
CAGGCGCGCG GTGAGCCGCG CTTTGCCACG CCCGAACAGG TCTCGCAGTT CCAGCGCATC 
GTGGCCTGGA GCGGGCGCAC CCAGTCCGGC GACATGGCCG AACTCGAAGC CTTGCCCGAC 
GACTCGCCGC TGCTGCCGAT GGTGACCTCC ACCGTCGACA ACTGCCTGGG CACCGAATGC 
CCGTTCTATA GCGAGTGCTT CGTGGTGCAA GCGCGCCAGC GTGCGCAAGC GGCCGATCTG 
GTGGTGGTCA ATCACCATCT GCTGCTGGCC GATCTGGCGC TCAAGCAGGA AGGCTTCGGC 
GAAATCCTGC CTGGCGCGCA GGCCTTCGTC ATCGACGAAG CGCATCAATT GCCGGAGCTG 
GCGGCCAATT TCTTCGGCGA AAGTTTCGGC ATGCGGCCGT GGCAGGAGCT GGCGCGCGAC 
TGCATGGTCG AAGCGCGCCT GGTGGCCGGC GCGCAAGCCA GCCTGCAGGC GCCGATCCTG 
GCTCTGGACG ACGCCTTGCG CAGCCTGCGC GCCGGCATGG AGGGGTTGCC GGCGCGTGGC 
ACGCAATGGC GTGCGCTGGC CAAGCCGCAG GTGCGCGAAG GGTTCGACGC GGTGCTGTCG 
TCATTGGCAC GGTTGGGCCA ATCCCTGCTG CCTTTGCGTG AGGCCTCGCC TGGCTTCGAT 
GGCTGCACCG CACGTGCGCA AGAAGCCTTG AATCGCCTGT CGCGCTGGTT GGGCGAAGAC 
GTGTCAGTAG CTGATTTCGC GCAGGATCCG CCAGAAGAGA CCGTCGACAA CGATGTGCTC 
TGGTACGAAC TCAGCCCGCG CGGCTTCCGC TGCCAGCGCA CGCCGCTGGA TGTATCCGGC 
CCGTTGCGCG AGCATCGCGA AAAATCGCAT GCAGCCTGGG TATTCACCTC GGCCACGCTG 
GCGGTGGGCG GCGAGTTCGA CCACATTGCG CAGCGTCTGG GTTTGAATGA TCCGGTGACC 
TTGCTGCAAC CCAGCCCGTT CGATTGGGCG CGTCAGGCCT TGTGCTATCT GCCGCCGAAC 
CTGCCCGATC CGGCCGCACG CGGGTTTGGC ACTGCGCTGA TCGGTGCGTT GACGCCGGTG 
CTGGAAGCCT CCAAAGGCCG TGCGTTTCTA TTGTTCGCCT CGCACCGCGC GCTGCGCGAA 
GCGGCCGAAG CCTTGCGCGG TGCGCCGTGG CCGTTATTCG TGCAGGGTGA GGCGCCGCGC 
GCGACCTTGC TACAGCGCTT CCGCGATTCC GGTAACGGTG TGCTGCTGGG CTCGGCCAGT 
TTCCGCGAGG GCGTGGACGT GGTCGGCGAT GCCTTGAGCG TGGTGGTGAT CGACAAGCTG 
CCGTTCGCCG CGCCCGACGA CCCGGTGTTC GAAGCGCGCC TGGATGCGAT TCGCCGCGAG 
GGCGGCAACC CGTTCCGCGA CGAGCAGCTG CCGCAGGCGG TGATCGCGCT CAAGCAGGGC 
GTGGGTCGAC TCATTCGCAG CGAAACCGAC CGTGGCGTGC TGGTGCTGTG CGACCCGCGG 
CTGGTCAACA AAAGCTATGG ACGCACCTTC ATGAAATCGC TGCCGCCATT TGCGCGCACC 
CACGCCATAG CCGATGTGCA AGCGTTTTTT GGTGTTGCAG AGGCGGTGGG CGACAATGGC 
GTACTCGCGT TGCCGTTCGG CGATGATCGA TCTTCTTATT CTTTCTGA 

 

Protein sequence

MSQLATVSIE ALSEGGALAR QLDAFAPRAA QLRLTGAIAE AFEQRDVLLA EAGTGTGKTY 
AYLVPALLSG LKTIVSTGTR ALQDQLFHRD LPRVRAALGV GLRSALLKGR ANYLCKYRTQ 
QARGEPRFAT PEQVSQFQRI VAWSGRTQSG DMAELEALPD DSPLLPMVTS TVDNCLGTEC 
PFYSECFVVQ ARQRAQAADL VVVNHHLLLA DLALKQEGFG EILPGAQAFV IDEAHQLPEL 
AANFFGESFG MRPWQELARD CMVEARLVAG AQASLQAPIL ALDDALRSLR AGMEGLPARG 
TQWRALAKPQ VREGFDAVLS SLARLGQSLL PLREASPGFD GCTARAQEAL NRLSRWLGED 
VSVADFAQDP PEETVDNDVL WYELSPRGFR CQRTPLDVSG PLREHREKSH AAWVFTSATL 
AVGGEFDHIA QRLGLNDPVT LLQPSPFDWA RQALCYLPPN LPDPAARGFG TALIGALTPV 
LEASKGRAFL LFASHRALRE AAEALRGAPW PLFVQGEAPR ATLLQRFRDS GNGVLLGSAS 
FREGVDVVGD ALSVVVIDKL PFAAPDDPVF EARLDAIRRE GGNPFRDEQL PQAVIALKQG 
VGRLIRSETD RGVLVLCDPR LVNKSYGRTF MKSLPPFART HAIADVQAFF GVAEAVGDNG 
VLALPFGDDR SSYSF