Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_01592 |
Symbol | |
ID | 6306720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 3320951 |
End bp | 3323137 |
Gene Length | 2187 bp |
Protein Length | 728 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642640473 |
Product | GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp synthetase I) ((P)ppGpp synthetase) |
Protein accession | YP_001914330 |
Protein GI | 188577401 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGGTGCCCG CCACCGTGTC CACTGTTGTG ACCAGTTCCT CATTCGATCG CCTGCAGGCT TTGTTGCAGC GCCCGGCCGT GGCCTCCATT TCCCCGGCAT TGCGCGAAGC GTTGGCGCGG GCCTGGCAGG AGCTGCCGCC CGCGCAGACC GATAACGTGC CGTGGGCCCT GCTTGGCGAC ACCCTGGACG CACTGGCGCT GCTGGCGGCC GACGAGGCCA CATTGATTGC AGCATTGCTG TTCGATCTGC CCGCGCTGCG CGGCGCGGTG ACCGACCTGC CGTGGCAGCC GGCGGAGCGG CGGGTGGCAG TGGAAGGATT GCTGGATGGC CTGGATGCAG CCGATCAGGT CTGGGCGCTG CATGCCGGGC GCGAGGCCGG GCGCAACAGC GAAGGGTTGC GGCGACTGCT GCTTTCCATC ATCCACGACC TGCGCGTGGT GCCGATCCTG TTGGCGCGGC AGCTGTCGCG CATGCGTGTG GCCGACCGTC TCAGTAAAGA ACAGCGCCAT GCACTGGCCC AACTCACGCG CGACATCCAC GCGCCGCTGG CGAACCGGCT GGGCATCTGG CAGGTGAAGT GGGAGCTGGA AGATCTGGCG TTCCGGCATC TGGAGCCTGA CACCTATCGC CGCATCGCCC GCGAAGTGGA CGAAACCCGC GTGGCGCGCG AGCGCTATCT GGAAGCGGTC AAGCGCACCT TGTCGGCGGC GCTCGCCCAG CAGGGCCTGC GCGCAGACGT CAGCGGGCGG CCCAAACACA TCTACAGCAT CTGGCGGAAG ATGCAGAAGA AGCGGCTGTC GTTCGATCAG CTATACGACA TCCGCGCGGT GCGGGTGATG GTCGACGATG TGGCGGCCTG TTACGCCGCG CTGGGCGCGG TGCATTCATT GTGGGCGCCG GTGCCGAGCG AGTTCGACGA TTACATCGCC CGGCCCAAGG CCAACGATTA TCGCTCGCTG CATACCGCGG TGGTCGGCCC GGAAGGGCGC ACGATCGAAA TCCAGATCCG CACCCATGAG ATGCACGCCC AGGCCGAACT CGGCGTGGCT GCGCACTGGA AATACAAGGA AGGCGGCAAG GGCGGCGAAA AGGCCTTCGA CCGCAAGATT CTGTGGATGC GCCAGCTGCT GGAACAGGTG CAGGAAGGCG AGCACGGCGA ACTGGCCGGC GCGCTGGATG CCGAGCTGAT CGAAGACCGC GTGTATGCGC TGACCCCCAA GGGCGAGGTG ATCGATCTGC CGCAAGGCGC AACGCCGCTG GATTTTGCGT ACCACGTGCA CACCATGGTC GGGCATCGCT GCCGCGGCGC GCGCGTCAAC GACCGCATCG TGCCGCTGAC CTACCGGCTG CGCAGCGGCG ACCGTGTGGA GATCATGACC GCCAAGGAAG CGGACCCGCG CCGCGACTGG TTGCTGGCCT CCAACGGTTT TCTGGCCAGC GGGCGTTCGC GCGACAAGGT GCGTGCGTGG TTCCACAAGC TGGACCGCGC GCGCAACGTG CAGGCCGGCA AGGATTTGCT CGATCGCGAG CTCAAACGCC TGGGCCTCCA GCATGCGGAT CTGAGCGTGG CCACGCGCAA ATTCCACGCC GACACCATCG ACGATTTGTA TATCCAGGTG GCATTGGGCG ATACCGGGCC GAATCAGGTC AGCCGCGCAT TACTGGAAGC CGAGCGTGCC GCCTCGCAGC CGGCGGTACC GGCGCCCCCG CGGCCGACTG CGCGTCGCGA GGGGTTGGGC AAATCCAAAT TCACCGTGGA GGGCGTGGGC AACCTGCTGG TGCAGCTGGC GCGGTGTTGC CAACCCGTGG CGGGCGAGCC GATTGCCGGT TACCTCACCC GCGGCCGCGG CATCACCGTG CATCGCACCG ATTGCGCGGC ATTGGCGCGC TTGGCCGCCG CCCACCCGCA GCGGGTCTTG CCGGTGGAGT GGGGCAAGGC CGGCACCGGC TACGAGGTCG ATGTGCAGGT GCGCGCGGTG GACCGCCGCT GGCTGCTCAA GGACATCACC AACCTGATCG CCCAGGAAGA CGCGCACGTG CTGGAAATCA ATAGCGACAA CGTGCGCGAC ACGGGCAGGG CGCAGCTGCG CTTGCGCCTG AAGGTGAGCG ATTACGACCA GCTGTCCGGA CTGCTTGGCA AGCTGGACGC GCTGCCCGGA GTGAGCGAGG TACGGCGGCT GGGCTGA
|
Protein sequence | MVPATVSTVV TSSSFDRLQA LLQRPAVASI SPALREALAR AWQELPPAQT DNVPWALLGD TLDALALLAA DEATLIAALL FDLPALRGAV TDLPWQPAER RVAVEGLLDG LDAADQVWAL HAGREAGRNS EGLRRLLLSI IHDLRVVPIL LARQLSRMRV ADRLSKEQRH ALAQLTRDIH APLANRLGIW QVKWELEDLA FRHLEPDTYR RIAREVDETR VARERYLEAV KRTLSAALAQ QGLRADVSGR PKHIYSIWRK MQKKRLSFDQ LYDIRAVRVM VDDVAACYAA LGAVHSLWAP VPSEFDDYIA RPKANDYRSL HTAVVGPEGR TIEIQIRTHE MHAQAELGVA AHWKYKEGGK GGEKAFDRKI LWMRQLLEQV QEGEHGELAG ALDAELIEDR VYALTPKGEV IDLPQGATPL DFAYHVHTMV GHRCRGARVN DRIVPLTYRL RSGDRVEIMT AKEADPRRDW LLASNGFLAS GRSRDKVRAW FHKLDRARNV QAGKDLLDRE LKRLGLQHAD LSVATRKFHA DTIDDLYIQV ALGDTGPNQV SRALLEAERA ASQPAVPAPP RPTARREGLG KSKFTVEGVG NLLVQLARCC QPVAGEPIAG YLTRGRGITV HRTDCAALAR LAAAHPQRVL PVEWGKAGTG YEVDVQVRAV DRRWLLKDIT NLIAQEDAHV LEINSDNVRD TGRAQLRLRL KVSDYDQLSG LLGKLDALPG VSEVRRLG
|
| |