Gene PXO_01576 details

Gene Information

• Locus tag: PXO_01576
• Symbol: recQ
• ID: 6306735
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: +
• Start bp: 3338789
• End bp: 3340585
• Gene Length: 1797 bp
• Protein Length: 598 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 642640488
• Product: ATP-dependent DNA helicase RecQ
• Protein accession: YP_001914345
• Protein GI: 188577416
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0514] Superfamily II DNA helicase
• TIGRFAM ID: [TIGR00614] ATP-dependent DNA helicase, RecQ family; [TIGR01389] ATP-dependent DNA helicase RecQ

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTTCTT CCGCACACGA ATTGCTCAGC CGCGTCTTCG GTTACGACGA CTTCCGCGGC 
CCACAGCAGG CCATCGTCGA ACACGTCGCT GCCGGTAACG ATGCTCTGGT GCTGATGCCT 
ACCGGCGGCG GCAAATCGCT GTGCTACCAA GTACCGGCGC TGCTGCGCGA TGGCATCGGC 
ATCGTGGTTT CGCCGCTGAT CGCGCTGATG CAGGATCAGG TCGAAGCCTT GCGCCAGCTC 
GGCGTGCGCG CCGAATTTCT CAATTCCACG CTCGATGCGG AGAACGCCCA GCGTGTGGAA 
CGTGCCCTGC TGTCCGGCGA TCTGGATCTG TTGTACGTCG CGCCGGAACG GCTGCTGACC 
CAGCGCTTCC TCTCATTGCT GGAACGCAGC CGCATCGCGC TGTTCGCCAT CGACGAGGCG 
CATTGCGTCT CGCAATGGGG CCATGATTTC CGCCCGGAAT ACCGCCAGCT CACCGTACTG 
CACGAGCGCT GGCCACACAT CCCGCGCATG GCCCTGACCG CCACCGCCGA CCCGCCGACC 
CAGCGCGAAA TTGCCGAGCG CCTGGACCTG GTGGACGCGC GCCATTTCGT CAGTTCCTTC 
GACCGCCCCA ACATCCGCTA CACCGTGGTG CAAAAGGACA ACGCGCGCAA ACAGCTGCAG 
GAATTCCTGG GCCGTTATCG CGGCTCGGCC GGCATCGTTT ATGCGATGTC GCGGCGCAAG 
GTCGAAGAAA CCGCGCAGCA ACTGTGCGCA CAAGGATTCA ATGCGCTGCC CTATCACGCC 
GGCCTGCCAG CCGAGGTGCG CGCAGAAAAC CAACGCCGTT TCCTGCGCGA GGACGGCATC 
ATCATGGCCG CCACGATCGC CTTCGGCATG GGCATCGACA AGCCGGACGT GCGCTTCGTG 
GCGCACGTGG ATCTGCCCAA GTCGCTGGAA GGCTACTACC AGGAAACCGG CCGCGCCGGT 
CGCGACGGCG ACCCTGCCGA AGCCTGGCTT TGCTACGGCC TGGGCGATGT GGTGCTGCTC 
AAGCAGATGA TCGAACAAGG CGAAGCCGCC GAAGAGCGCA AGCGTCTGGA GCGCGCCAAG 
CTCGATCACC TGCTGGGTTA CTGCGAATCC ATGCAATGCC GTCGCCAGGT ACTGCTGGCC 
GGTTTCGGCG AGACCTATCC CAAACCCTGC GGCAACTGCG ACAACTGCCT GACGCCGGCT 
GCGGCCTGGG ACGCCACGGT GGCCTCGCAG AAAGCGCTCA GTTGCGTCTA CCGCAGCGGC 
CAACGCTTCG GCGTGGGTCA TCTGATCGAC ATCCTGCGCG GCAGCGAAAA CGAGCGCATC 
AAACAGTTGG CTCACGATCA ACTGAGCACC TACGGCATCG GCCGCGACCT GGACGAACGC 
ACCTGGCGCG GCGTGTTTCG CCAGCTGGTG GCAGCCAGCC TGCTGGAAGT GGACAGCGAA 
GGCCACGGCG GCCTGCGCCT CACCGATGCC AGTCGCCAGG TGCTCAAGGG CGAGCGCCAG 
GTCATGATGC GCCGCGAAAA CCCAGCCGCC GGACGCGACC GCAGCGCACA GCGCACCGGC 
CTGCCAGTGC AGGCGCAGGA TCTGGTGCTG TTCAACGCCT TGCGCGGCCT GCGCGCAGAG 
TTGGCGAAGC AACAGAACGT GCCGGCCTTT GTCATCTTCC ACGACAGCAC CTTGCGCAAC 
ATCGCCGAAC AACGGCCCAC GAGCATCGAC GCATTGTCGC GGGTAGGCGG CATCGGCGGC 
GGCAAGCTGG CCCGCTACGG CGCGCAGTTG ATCGAGATCG TGCGCGAACA GGGCTGA 

 

Protein sequence

MSSSAHELLS RVFGYDDFRG PQQAIVEHVA AGNDALVLMP TGGGKSLCYQ VPALLRDGIG 
IVVSPLIALM QDQVEALRQL GVRAEFLNST LDAENAQRVE RALLSGDLDL LYVAPERLLT 
QRFLSLLERS RIALFAIDEA HCVSQWGHDF RPEYRQLTVL HERWPHIPRM ALTATADPPT 
QREIAERLDL VDARHFVSSF DRPNIRYTVV QKDNARKQLQ EFLGRYRGSA GIVYAMSRRK 
VEETAQQLCA QGFNALPYHA GLPAEVRAEN QRRFLREDGI IMAATIAFGM GIDKPDVRFV 
AHVDLPKSLE GYYQETGRAG RDGDPAEAWL CYGLGDVVLL KQMIEQGEAA EERKRLERAK 
LDHLLGYCES MQCRRQVLLA GFGETYPKPC GNCDNCLTPA AAWDATVASQ KALSCVYRSG 
QRFGVGHLID ILRGSENERI KQLAHDQLST YGIGRDLDER TWRGVFRQLV AASLLEVDSE 
GHGGLRLTDA SRQVLKGERQ VMMRRENPAA GRDRSAQRTG LPVQAQDLVL FNALRGLRAE 
LAKQQNVPAF VIFHDSTLRN IAEQRPTSID ALSRVGGIGG GKLARYGAQL IEIVREQG