| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_01563 |
|---|
| Symbol | tolA |
|---|
| ID | 6306750 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 3350706 |
|---|
| End bp | 3351674 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642640502 |
|---|
| Product | protein TolA |
|---|
| Protein accession | YP_001914358 |
|---|
| Protein GI | 188577429 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02794] TolA protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.479302 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGTGCACG TGCTGGTCGC GCTGGTGTTT ATCGCCGGCT GGCTGTGGTC GCCCGAACGC
TCGGTCGAAC CGGCCGCCGG CGACCCCAGC ATGGAAGCCT CGCTGGACGT GTCCGCCGCT
GATGCGCGGG TTGCACGCCA GGCATTGAAG GCCACGCCGG TCGAAACGCC GCCGCCGCCG
GCACCATTGC CCGAACCTGC GCCGGAAGAC AGCGTGCCGC CGCCGCAGCC GATTCCCGAG
CCGCGTCCGC AGGATGCGCC CACGCCACAG CAGGCACAGG CACAGGAGCG TGTCGCCCAG
CCCGACAAGG TCGACCAGGA TCGTGTCGAC GCCTTGGCGA TTTCCGCCGA AAAGGCCAGG
CAGGAACAGG AAGCCAAGCG CCGTCAGGAG CAGATCGATC TGACCGAGCG CAAACGCCAG
GAAGAGGCAG AGCAGAAGTT GCGCTTGGCC AAGCAGCAGG AAGAAGCCGA CGCCAAGAAG
AAGCAGGCGG CCGCGCAGCA GGCGGCGGAA GACGCCGAAC GCCAGAAGAA GATCGCCGAC
ATCCGTCGTC AGCGCGCGCA AGCCGATAAG GACATGGCGC TGGCCGAGCA AAAGCTGCGC
CAGGTTGCCG CCGCACGTGC GCAGCAGTCC TCCGCGGCCA CCGCGACCAG CGCGCAGCCG
ACTGCAGGGC AGGGCGGTAC CAGCACCGAT TTGTCGGCCA AGTACGCTGC GGCGATCCAG
CAAAAGGTGT TGGCGCAGTG GGTGCGCCCG CCGTCGGTGC CGCCGGGCCA GAAATGCACG
ATCAACATCC GGCAGCTGCC GGGCGGCAGC GTGATGGAGG CCAAGGTGGC GCCGGGCTGC
CCCTATGACG AGGCCGGTCA GCGTTCGATC GAGGCGGCCG TGTTGAGTGC ACAGCCATTG
CCGTACCGCG GGTTTGAATC GGTGTTCCAG CGCAATTTGA CCTTCGTATT CACCGCGCAG
GACCAGTAA
|
|---|
| Protein sequence | MVHVLVALVF IAGWLWSPER SVEPAAGDPS MEASLDVSAA DARVARQALK ATPVETPPPP
APLPEPAPED SVPPPQPIPE PRPQDAPTPQ QAQAQERVAQ PDKVDQDRVD ALAISAEKAR
QEQEAKRRQE QIDLTERKRQ EEAEQKLRLA KQQEEADAKK KQAAAQQAAE DAERQKKIAD
IRRQRAQADK DMALAEQKLR QVAAARAQQS SAATATSAQP TAGQGGTSTD LSAKYAAAIQ
QKVLAQWVRP PSVPPGQKCT INIRQLPGGS VMEAKVAPGC PYDEAGQRSI EAAVLSAQPL
PYRGFESVFQ RNLTFVFTAQ DQ
|
|---|
| |