Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_01559 |
Symbol | ruvB |
ID | 6306754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 3353644 |
End bp | 3354681 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642640506 |
Product | Holliday junction DNA helicase RuvB |
Protein accession | YP_001914362 |
Protein GI | 188577433 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.192423 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACCAGC GCATCATCGC CAGCAGCTCC ACCCGCGAAG ACGATGCCGC CGATGCGAGC ATTCGTCCCA AGCGTTTGGC CGATTATCTC GGCCAGCAGC CGGTGCGCGA GCAGATGGAG ATCTACATCC AGGCGGCCAA GGCGCGCGGC GAGGCGATGG ATCATGTGCT GATCTTCGGC CCGCCCGGGT TGGGCAAGAC CACGCTCAGC CACGTCATCG CCAACGAGTT GGGCGTGAGC CTGCGCGTGA CCTCCGGCCC GGTGATCGAA AAGGCCGGCG ATCTGGCCGC GCTGCTGACC AACCTGCAGC CGCACGATGT GTTGTTCATC GACGAAATCC ACCGCCTCTC GCCGGTGGTG GAAGAAGTGC TGTACCCGGC GATGGAAGAT TTCCAGATCG ACATCATGAT CGGCGACGGC CCGGCCGCGC GTTCGATCAA GATCGATTTG CCGCCGTTCA CCCTGATCGG CGCCACCACC CGTGCCGGGT TGCTGACCGC GCCACTGCGC GACCGCTTCG GCATCGTGCA GCGGCTGGAG TTCTATTCGC CGCAGGAGCT GACCCGCATC GTGATCCGCT CGGCGGCAAT TCTAGGCATC GACTGCACGC CCGAGGGCGC TGCGGAAATC GCACGCCGCG CGCGTGGAAC CCCGCGTATC GCCAACCGGC TGTTGCGCCG CGTGCGCGAC TACGCCCAGG TCAAGGCGGC CGGGCATATC GATTTGCCGG TGGCGCAGGC GGCCATGCAG ATGCTCAAGG TCGACCCGGA AGGGTTCGAC GAGCTCGACC GTCGCATGTT GCGCACCATC GTCGAGCATT TCGATGGCGG CCCAGTCGGT GTTGAATCGC TCGCCGCCTC GCTGTCGGAA GAGCGCGGCA CGCTGGAAGA CGTGATCGAA CCCTATCTGA TCCAGCAGGG CTTTCTGATC CGCACCGCGC GCGGCCGCAT GGTCACCACC AAGGCCTATC TGCATCTGGG CCTGAAGCCG CCGCGCGACC GCGCTCCGGG CATCGGCGAA CCGGGAGACT TGTTCTGA
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Protein sequence | MDQRIIASSS TREDDAADAS IRPKRLADYL GQQPVREQME IYIQAAKARG EAMDHVLIFG PPGLGKTTLS HVIANELGVS LRVTSGPVIE KAGDLAALLT NLQPHDVLFI DEIHRLSPVV EEVLYPAMED FQIDIMIGDG PAARSIKIDL PPFTLIGATT RAGLLTAPLR DRFGIVQRLE FYSPQELTRI VIRSAAILGI DCTPEGAAEI ARRARGTPRI ANRLLRRVRD YAQVKAAGHI DLPVAQAAMQ MLKVDPEGFD ELDRRMLRTI VEHFDGGPVG VESLAASLSE ERGTLEDVIE PYLIQQGFLI RTARGRMVTT KAYLHLGLKP PRDRAPGIGE PGDLF
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