Gene PXO_01559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_01559 
SymbolruvB 
ID6306754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp3353644 
End bp3354681 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content66% 
IMG OID642640506 
ProductHolliday junction DNA helicase RuvB 
Protein accessionYP_001914362 
Protein GI188577433 
COG category[L] Replication, recombination and repair 
COG ID[COG2255] Holliday junction resolvasome, helicase subunit 
TIGRFAM ID[TIGR00635] Holliday junction DNA helicase, RuvB subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.192423 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACCAGC GCATCATCGC CAGCAGCTCC ACCCGCGAAG ACGATGCCGC CGATGCGAGC 
ATTCGTCCCA AGCGTTTGGC CGATTATCTC GGCCAGCAGC CGGTGCGCGA GCAGATGGAG
ATCTACATCC AGGCGGCCAA GGCGCGCGGC GAGGCGATGG ATCATGTGCT GATCTTCGGC
CCGCCCGGGT TGGGCAAGAC CACGCTCAGC CACGTCATCG CCAACGAGTT GGGCGTGAGC
CTGCGCGTGA CCTCCGGCCC GGTGATCGAA AAGGCCGGCG ATCTGGCCGC GCTGCTGACC
AACCTGCAGC CGCACGATGT GTTGTTCATC GACGAAATCC ACCGCCTCTC GCCGGTGGTG
GAAGAAGTGC TGTACCCGGC GATGGAAGAT TTCCAGATCG ACATCATGAT CGGCGACGGC
CCGGCCGCGC GTTCGATCAA GATCGATTTG CCGCCGTTCA CCCTGATCGG CGCCACCACC
CGTGCCGGGT TGCTGACCGC GCCACTGCGC GACCGCTTCG GCATCGTGCA GCGGCTGGAG
TTCTATTCGC CGCAGGAGCT GACCCGCATC GTGATCCGCT CGGCGGCAAT TCTAGGCATC
GACTGCACGC CCGAGGGCGC TGCGGAAATC GCACGCCGCG CGCGTGGAAC CCCGCGTATC
GCCAACCGGC TGTTGCGCCG CGTGCGCGAC TACGCCCAGG TCAAGGCGGC CGGGCATATC
GATTTGCCGG TGGCGCAGGC GGCCATGCAG ATGCTCAAGG TCGACCCGGA AGGGTTCGAC
GAGCTCGACC GTCGCATGTT GCGCACCATC GTCGAGCATT TCGATGGCGG CCCAGTCGGT
GTTGAATCGC TCGCCGCCTC GCTGTCGGAA GAGCGCGGCA CGCTGGAAGA CGTGATCGAA
CCCTATCTGA TCCAGCAGGG CTTTCTGATC CGCACCGCGC GCGGCCGCAT GGTCACCACC
AAGGCCTATC TGCATCTGGG CCTGAAGCCG CCGCGCGACC GCGCTCCGGG CATCGGCGAA
CCGGGAGACT TGTTCTGA
 
Protein sequence
MDQRIIASSS TREDDAADAS IRPKRLADYL GQQPVREQME IYIQAAKARG EAMDHVLIFG 
PPGLGKTTLS HVIANELGVS LRVTSGPVIE KAGDLAALLT NLQPHDVLFI DEIHRLSPVV
EEVLYPAMED FQIDIMIGDG PAARSIKIDL PPFTLIGATT RAGLLTAPLR DRFGIVQRLE
FYSPQELTRI VIRSAAILGI DCTPEGAAEI ARRARGTPRI ANRLLRRVRD YAQVKAAGHI
DLPVAQAAMQ MLKVDPEGFD ELDRRMLRTI VEHFDGGPVG VESLAASLSE ERGTLEDVIE
PYLIQQGFLI RTARGRMVTT KAYLHLGLKP PRDRAPGIGE PGDLF