Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_01555 |
Symbol | |
ID | 6306758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 3358298 |
End bp | 3359026 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642640510 |
Product | hypothetical protein |
Protein accession | YP_001914366 |
Protein GI | 188577437 |
COG category | [S] Function unknown |
COG ID | [COG0217] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.139362 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTAGAG GCCCCTCGAT CGAAGGCCGC AAGAACGCCT CCGACGCCAA ACGCGGCAAG ATGTTCACCA AGATCATCCG CGAGATCAGC GTAGCCGCGC GCGCTGGCGG CGGCGACCCG TCCAACAATC CGCGTCTGCG CACCGCCATG GACAAGGGCC TGTCGGCGAA CATGTCCAAG GACGTGATCG AGCGCGCCAT CAAGAAATCC ACCGGCGAGC TGGAAGGCGT GGAATACGAA GAAGTGCGCT ACGAGGGCTA TGCGCCCGGC GGCGTGGCGG TGATCGTGGA CTGCCTGACC GACAACCGCG TGCGCACCGT GGCCGACGTG CGCCATGCCT TCAGCAAATG CGGCGGCAAC ATGGGCACCG AGGGCTCGGT GGCCTTCATG TTCAAGCGCC TGGGCGTGCT CAGCTTCGCC GCCGGCATCG ATGAGGACAC CCTCACCGAC GCCGCCATCG ACGCCGGCGC CGACGATGTG GTGGTCTATC CCGAAGACGG CGCCATCGAC GTGCTCACCG CCCCGGACGC CTTCGCCCAG GTCAGGGACG CCCTGGCCGC CGCCGGCCTG GAGCCGGCGC ACGCCGAAAT CGCCTTTCGC GCCGACAACG ACATCGTCGT GGACGGCGAC ACGGCGGTGC AGGTCCGCAA GCTGCTGGAC ATGCTCGAAG ACCTGGACGA CGTGCAGGAC GTGTATTCGA ACGTCGATCA AGCGGCGCTT GGCGCGTAG
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Protein sequence | MGRGPSIEGR KNASDAKRGK MFTKIIREIS VAARAGGGDP SNNPRLRTAM DKGLSANMSK DVIERAIKKS TGELEGVEYE EVRYEGYAPG GVAVIVDCLT DNRVRTVADV RHAFSKCGGN MGTEGSVAFM FKRLGVLSFA AGIDEDTLTD AAIDAGADDV VVYPEDGAID VLTAPDAFAQ VRDALAAAGL EPAHAEIAFR ADNDIVVDGD TAVQVRKLLD MLEDLDDVQD VYSNVDQAAL GA
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