Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_01540 |
Symbol | radA |
ID | 6306775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 3371629 |
End bp | 3373023 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642640526 |
Product | DNA repair protein RadA |
Protein accession | YP_001914382 |
Protein GI | 188577453 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1066] Predicted ATP-dependent serine protease |
TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.850923 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGGCGA AGGCGAAGAC GGCCTACGTG TGCGGGGAGT GCGGTGCCGA GTACACAAAG TGGCAGGGGC AGTGCACCGA GTGCGGTGTC TGGAACACGC TGAGCGAAAT TGTGCTCGAA AGCGCAACGC CGGGCGGCAA GGCCTCGCCT GCGACCTCGC GGCGTATCGG TTGGGCCGGC AAGGCCGAGG CGCCCAAGAT CACTGCGCTC AAGGACGTGC AGCAGTCCGA GCAGGCGCGC GTGTCCACCG GCATCGGCGA GTTCGACCGG GTGTTGGGCG GCGGGTTGGT CGAGGGGGCG GTGGTGCTGA TCGGCGGCGA CCCGGGCATC GGCAAATCGA CGCTGCTGCT GCAGGCGCTG GCGAGCATGG CCTCTACGTT GCCGGTGTTG TACGTCACCG GCGAAGAATC GCTGGCCCAG GTAGCAGGGC GCGCGGTGCG CCTGGATCTG CCGCTGGACG GCCTGAACGC CCTGTCCGAA ACCGGTATCG AACACATCCT GCAGCACGCC AGCGTGGCGC GGCCGAGGCT GATCGTGGCC GATTCGGTGC AGACCTTGTG GACCGAATCG CTTACCGCAG CGCCAGGCTC GGTGAGCCAG GTGCGCGAGA GCGCAGCGCG GCTGGTGCGC TACGCCAAGG AAACCGGCAC CGCCGTGTTT CTGGTCGGCC ATGTGACCAA GGAAGGCGGT ATCGCCGGGC CACGCGTGCT TGAGCACATG GTCGATGCGG TGCTGTATTT CGAAGGCGAA AGTGGCAGCC GATTCCGCCT GTTGCGCGCG TTCAAGAACC GCTTCGGTGC GGTCAACGAG CTAGGCGTCT TCGCGATGGG CGAGAAGGGC CTCAAGGAAG TCTCCAACCC ATCGGCAATC TTCCTGTCCG GTGGCAGCAC TCAGCAACCG GGCAGTTGCG TGATGGTCAC CCGCGAAGGC ACCCGCCCCC TGATGGTGGA GGTGCAGGCC TTGGTGGATG CCTCGCCGTT GTCCAATCCG CGCCGCGTTG CGGTGGGGCT GGAGCAGAAC CGGCTGGCGA TGTTGCTGGC GGTCCTGCAC CGCCATGGCG GCATCGTGGT CGGCGATCAG GACGTGTTCG TCAATGTGGT GGGTGGCATC CGCGTGCAGG AAACGGCAGC CGATCTGCCC GTGCTGCTGG CGGTGCTGTC GTCGCTGCGC GACCGGCCGT TGGCCGAAAA GACCATCGCG TTCGGCGAAG TGGGACTGTC CGGCGAAATC CGCCCGGTGC CCAACGGCGA GGACCGCCTG AAGGAAGCGG CGACGCATGG CTTCAAGCGC GCCATTGTGC CCCGCGCCAA TGCGCCCAAG ACGACCAGCA TCAAGGGAAT GGAAATTATC GCAGTGGAGC GCTTGAGACA GGCGCTGGAG GTGGCGGCAG ACTGA
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Protein sequence | MMAKAKTAYV CGECGAEYTK WQGQCTECGV WNTLSEIVLE SATPGGKASP ATSRRIGWAG KAEAPKITAL KDVQQSEQAR VSTGIGEFDR VLGGGLVEGA VVLIGGDPGI GKSTLLLQAL ASMASTLPVL YVTGEESLAQ VAGRAVRLDL PLDGLNALSE TGIEHILQHA SVARPRLIVA DSVQTLWTES LTAAPGSVSQ VRESAARLVR YAKETGTAVF LVGHVTKEGG IAGPRVLEHM VDAVLYFEGE SGSRFRLLRA FKNRFGAVNE LGVFAMGEKG LKEVSNPSAI FLSGGSTQQP GSCVMVTREG TRPLMVEVQA LVDASPLSNP RRVAVGLEQN RLAMLLAVLH RHGGIVVGDQ DVFVNVVGGI RVQETAADLP VLLAVLSSLR DRPLAEKTIA FGEVGLSGEI RPVPNGEDRL KEAATHGFKR AIVPRANAPK TTSIKGMEII AVERLRQALE VAAD
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