Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_01339 |
Symbol | |
ID | 6306973 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 3561289 |
End bp | 3561690 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642640720 |
Product | gpU |
Protein accession | YP_001914572 |
Protein GI | 188577643 |
COG category | [R] General function prediction only |
COG ID | [COG3499] Phage protein U |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0734436 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGATGT CCTACGGCAC GTTCGTGTTT TCCCTGGACA GCGCCGCCTT CTTGCAGTTG CAGCGGCAGA TGAGTTGGCG CCATGCCAGC AGCGAGCGCA TTGGCGCGCG TTCGGCCAGC CAATTCCTGG GCCCAGGCGA TGACACCATC GAGCTCTCTG GCCTGATCGC TCCCGAACTC ACCGGCACGC GCGCCTCGCT GGACACGCTG CGCGAACTCG CAGCTGATGG TGAGCCGTTA CCGTTGGTCG ACGGTGCCGG CGTGGTCTAT GGGCCGTATC TTCTGCTAAC GATCAACGAG ACGGCCTCGC TGTTTTTCGA GGACGGCACC CCGCGCCGAA TCGAGTTTCA ACTGAGCCTG CGACGCGCAG ACGACCTGGC ACCCAGGGCG AGCGCCGGAT GA
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Protein sequence | MMMSYGTFVF SLDSAAFLQL QRQMSWRHAS SERIGARSAS QFLGPGDDTI ELSGLIAPEL TGTRASLDTL RELAADGEPL PLVDGAGVVY GPYLLLTINE TASLFFEDGT PRRIEFQLSL RRADDLAPRA SAG
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