| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_01307 |
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| Symbol | |
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| ID | 6307007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 3591450 |
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| End bp | 3593564 |
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| Gene Length | 2115 bp |
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| Protein Length | 704 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642640754 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_001914605 |
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| Protein GI | 188577676 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.624183 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCAAAAA TCACCAAAAC CTTCCAGTAC GGCAAGCACA CCGTCACCCT TGAGACGGGC
GAAATCGCTC GCCAGGCAGG CGGTGCCGTC ATCGTCAAGT TCGACGACAC CGTACTGCTG
GTCACCGCCG TCGCCGCCAA GAGCGCGCGC GAAGGGCAGG ACTTCTTTCC CCTGACGGTC
GATTATCAGG AGAAGTTCTA CGCCGGCGGC CGCATCCCGG GCGGCTTCTT CAAGCGCGAA
GGACGTGCGA CCGAGAAGGA AACGTTGATC TCGCGCCTGA TCGATCGTCC GATCCGTCCG
CTGTTCCCGG AGGACTACAA GAACGAAGTG CAGATCATCG CCACGGTGAT GTCGATGAAC
CCTGACATCG ACGGCGATAT CGCCGCGCTG ATCGGCGCAT CGGCCGCGCT GTCGCTGGCC
GGCACTCCGT TCAACGGCCC GATCGCTGCG GCGAAGGTCG GTTACAAGAA TGGCGAATAC
ATCCTCAACC CGACCGTGAC CGATCTGAAG GATTCGCAGC TGGAGTTGGT CGTGGCCGGT
ACCGCCAATG CGGTGCTGAT GGTCGAGTCC GAAGCCGAGT TGCTGTCGGA AGAAGTGATG
CTGGGCGCGG TGACGTTCGG CCATCGCGAA ATGCAGAAAG TCATCAACAT CATCAACGAG
CTGGCCGTCG AAGCCGGCAC CAAGCCGTCC GATTGGGTGG CTCCGGCGAA GAACGACGGC
ATGATCGCCG CGCTGAAGGA AGCAGTGGGC GACCAGCTCG CTTCGGCTTT CCAGGTGCGC
GACAAGCTGC AGCGCCGCGA TGCGATTTCG GCGATCAAGA AGGACGTGCT GGGTGCGCTG
GCGCCGCGCG CCACGATCGA AGGCTGGGCT GCCGGTGATC TGGCCAAGGA ATTCGGCGAG
CTGGAATACC AGACCATGCG TGGCTCGGTG CTCAGCACCA AGGTGCGTAT CGACGGCCGT
GCACTGGATA CCGTGCGTCC GATCAGCGCC AAGGCCGGCG TGCTGCCGCG GACCCATGGC
TCGGCGCTGT TCACCCGCGG CGAGACGCAG GCGATCGTGA TCACCACGCT CGGCACCGCA
CGCGACGGTC AGGTCATCGA CGCAGTCTCG GGCGAGTACA AGGAAAACTT CCTGTTCCAT
TACAACTTCC CTCCGTACTC GGTAGGCGAG TGCGGTCGTT TCGGTGCACC GAAGCGTCGC
GAAATCGGTC ACGGCCGTCT GGCCAAGCGC GGCGTGCTTG CCGTGATGCC GAGCCTGGAA
GAATTCCCGT ACACCATCCG CGTGGTTTCG GAAATTACCG AGTCCAACGG TTCGTCCTCG
ATGGCATCGG TGTGCGGTAG CTCGCTGGCG CTGATGGACG CCGGTGTGCC GATCAAGGCG
CCGGTTGCCG GTATCGCGAT GGGCCTGGTC AAGGAAGGCA ACGACTTCGT CGTGCTTTCC
GACATCCTGG GCGACGAAGA TCACCTGGGC GACATGGACT TCAAGGTGGC CGGTACTGCC
GAAGGCGTGT CCGCGCTGCA GATGGACATC AAGATCGAAG GCATCACCGA AGAGATCATG
AAGCAGGCAT TGCAGCAGGC CAAGGCTGGT CGTCTGCACA TTCTGGGCGA GATGGCGCAT
GCACTGACCA CACCGCGTCA GGAACTGAGC GACTACGCGC CGCGCCTGCT GACCATCAAG
ATTCACCCGG ACAAGATCCG TGAAGTGATC GGCAAGGGCG GCTCGACCAT CCAGGCGATC
ACCAAGGAAA CCGGTACGCA GATCGACATC CAGGACGACG GCACGATCAT CATTGCCTCG
GTCAACGCGA TTGCCGCGCA GGCTGCGAAG TCACGCATCG AGCAGATCAC CTCGGACGTG
GAGCCGGGCC GCATCTATGA AGGCAAGGTC GCCAAGATCA TGGACTTCGG CGCGTTCGTC
ACCATCCTGC CGGGCAAGGA CGGTCTGGTG CACGTCTCGC AGATTTCCAG CGAGCGCGTG
GAGAAGGTCG GCGACAAGTT GAAGGAAGGC GATCTGGTCC GCGTCAAAGT GCTGGAAGTG
GACAAGCAGG GCCGCATCCG TCTGTCGATC AAGGCAGTGG AAGAAGGCGA AGGCGTTCCG
GCTTCGGCCG AGTAA
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| Protein sequence | MAKITKTFQY GKHTVTLETG EIARQAGGAV IVKFDDTVLL VTAVAAKSAR EGQDFFPLTV
DYQEKFYAGG RIPGGFFKRE GRATEKETLI SRLIDRPIRP LFPEDYKNEV QIIATVMSMN
PDIDGDIAAL IGASAALSLA GTPFNGPIAA AKVGYKNGEY ILNPTVTDLK DSQLELVVAG
TANAVLMVES EAELLSEEVM LGAVTFGHRE MQKVINIINE LAVEAGTKPS DWVAPAKNDG
MIAALKEAVG DQLASAFQVR DKLQRRDAIS AIKKDVLGAL APRATIEGWA AGDLAKEFGE
LEYQTMRGSV LSTKVRIDGR ALDTVRPISA KAGVLPRTHG SALFTRGETQ AIVITTLGTA
RDGQVIDAVS GEYKENFLFH YNFPPYSVGE CGRFGAPKRR EIGHGRLAKR GVLAVMPSLE
EFPYTIRVVS EITESNGSSS MASVCGSSLA LMDAGVPIKA PVAGIAMGLV KEGNDFVVLS
DILGDEDHLG DMDFKVAGTA EGVSALQMDI KIEGITEEIM KQALQQAKAG RLHILGEMAH
ALTTPRQELS DYAPRLLTIK IHPDKIREVI GKGGSTIQAI TKETGTQIDI QDDGTIIIAS
VNAIAAQAAK SRIEQITSDV EPGRIYEGKV AKIMDFGAFV TILPGKDGLV HVSQISSERV
EKVGDKLKEG DLVRVKVLEV DKQGRIRLSI KAVEEGEGVP ASAE
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