Gene PXO_01296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_01296 
Symbol 
ID6307019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand- 
Start bp3606569 
End bp3607231 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content63% 
IMG OID642640766 
ProductNADH dehydrogenase subunit J 
Protein accessionYP_001914616 
Protein GI188577687 
COG category[C] Energy production and conversion 
COG ID[COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.342032 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGACT GGGTCACTCT TGCTTTCTAC GCCTTCTCCG CCGTCGCGGT CGTGTCCGCC 
GGTGCGGTGA TCAGCGTGCG CAACCCGGTG TACGCCGTGT TGTGCCTGAT CCTCACGTTC 
TTCTCGATGG CATGCATCTG GTTGCTGGTT GGCGCCGAAT TCCTCGGTGT GACGCTGGTG 
CTGGTCTACG TCGGCGCAGT GATGGTGCTG TTCCTGTTCG TGGTGATGAT GCTGGACATC 
GACACCAGCC GCCTTCGCGA GGGGTGGGTC AAGTACATGC CGCTGGGCGT CATCATGGCG 
GTTGCCATGT TGGCGCAGAT GGTCACCTTG ATCGGCGTCA AGGCACGTAG CGCCACGCCG 
TTCCCGGCGG ACAACGCTGC AGCGCAAGCC GCGGACAGCT CCAACCTGAC CTGGTTGGCC 
AAGAGCCTGT ACACCGAGTT CCTGCTGCCG TTCGAGTTTG CTGCGGTGAT CCTGACCGTG 
GCGGTGGTTG CTGCGGTGAT GCTGACCTTG CGCAAGCGCA CCGGCATCAA GTTGCAGAAC 
GCCGGCGAGC AGTCACGGGT GAAAGCGGGC GACCGTCTGC GCATGGTCAA AATGGCGGTT 
GAAAAGCCGG TACAGGTTGC GCCGCAGGGC GACGCGGCCG ACGGACAGGA GGCGAAGTCT 
TGA
 
Protein sequence
MMDWVTLAFY AFSAVAVVSA GAVISVRNPV YAVLCLILTF FSMACIWLLV GAEFLGVTLV 
LVYVGAVMVL FLFVVMMLDI DTSRLREGWV KYMPLGVIMA VAMLAQMVTL IGVKARSATP 
FPADNAAAQA ADSSNLTWLA KSLYTEFLLP FEFAAVILTV AVVAAVMLTL RKRTGIKLQN 
AGEQSRVKAG DRLRMVKMAV EKPVQVAPQG DAADGQEAKS