Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_01291 |
Symbol | |
ID | 6307024 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 3612385 |
End bp | 3612912 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642640771 |
Product | NADH dehydrogenase subunit E |
Protein accession | YP_001914621 |
Protein GI | 188577692 |
COG category | [C] Energy production and conversion |
COG ID | [COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit |
TIGRFAM ID | [TIGR01958] NADH-quinone oxidoreductase, E subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.17741 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGCGA CGGGTAATTT CGAAGCGGCG CGCGATGTTG ATCCGCAGGT GGTGCTGAGC GACAAGACGC GCGCGCACAT CGATCATTGG TTGGCCAAGT TTCCGCCCGA TCGCAAGCGT TCGGCGGTGT TGCAGGGCTT GCATGCCGCA CAGGAACAGA ACCAGGGCTG GCTGACCGAC GAACTGATCG TCGGCGTGGC CAAGTACCTG GAGCTGCCGC CGGTGTGGGC GTACGAGGTC GCCAGCTTCT ACTCGATGTT CGAGACCGAA AAGGTCGGCC GCCACAACGT GGCGTTCTGC ACCAACATCA GCTGCTGGCT CAACGGCGCC GAAGATCTGC TGGCGCACGC GGAAAAGAAG CTGGGCTGCA AGCTGGGTCA GTCGACGGTC GATGGCCGCG TCTACCTCAA GCGCGAAGAA GAGTGCCTGG CTGCCTGCTC TGCGGCGCCG ATGATGGTCA TCAACGGTCA TTATCACGAG CACCTGACGA AAGAGAAGGT CGACGCGCTG CTGGACGGGC TGGAGTAA
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Protein sequence | MKATGNFEAA RDVDPQVVLS DKTRAHIDHW LAKFPPDRKR SAVLQGLHAA QEQNQGWLTD ELIVGVAKYL ELPPVWAYEV ASFYSMFETE KVGRHNVAFC TNISCWLNGA EDLLAHAEKK LGCKLGQSTV DGRVYLKREE ECLAACSAAP MMVINGHYHE HLTKEKVDAL LDGLE
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