| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_01270 |
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| Symbol | trpB |
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| ID | 6307047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 3629147 |
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| End bp | 3630364 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642640794 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_001914643 |
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| Protein GI | 188577714 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0133] Tryptophan synthase beta chain |
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| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGGCCC AGCCCATCAG TGACTTTTAC GCCTATCCGG ATGCTGCTGG CCACTTTGGC
AAGTTTGGCG GCCGGTTCGT CGCCGAAACC TTGATTGGCC CGCTGCAGGA GCTGTCCGCC
GCCTACGATC AAGCGCGGCA GGATCCGAGC TTCATCGCCG AATACGACAA GGACCTCAAG
CATTACGTCG GCCGCCCCAG CCCGATCTAC CATGCCGAAC GGCTCAGCCG TGAAGTGGGT
GGGGCGCAGA TCCTGCTCAA GCGCGAAGAC CTCAACCACA CCGGCGCGCA CAAGATCAAC
AACACCATCG GCCAGGCCCT GCTGGCCAGC CGCATGGGCA AGACCCGCAT CATCGCCGAG
ACCGGCGCCG GCCAGCACGG CGTGGCCAGC GCCACTGTCG CTGCACGTCT GGGCCTGGAA
TGCCTGGTCT ACATGGGCGC CACCGACATC GAACGGCAGA AGATCAACGT CTATCGCATG
AAGCTGCTCG GTGCGACGGT GATCCCGGTG ACCTCCGGTT CGGCCACGCT CAAGGACGCG
CTCAACGAAG CGATGCGCGA CTGGGTCACC AACGTGCGCG ACACCTTCTA CATCATCGGC
ACCGTGGCCG GCCCTGACCC GTATCCGCGC ATGGTGCGTG ACTTCAACGC GATTGTCGGC
CGCGAGGCGC GCGCGCAGAT GCTGGAAGAC TACGGCCGTC TGCCGGATGC GATCAGCGCC
TGCGTCGGTG GCGGTAGCAA TGCGATCGGC CTGTTCCATG CCTTCCTCAA CGACCCGGGC
GTCAAGATCT ATGGCGCCGA GGCGGCCGGC GACGGCATCG CTACCGGCCG CCATGCGGCA
TCGATCGCCG CAGGGCGCCC CGGTGTGTTG CATGGCAATC GCACCTATGT GATTTGCGAC
GACGATGGCC AGATCACCGA AACCCATTCG ATCTCTGCCG GCCTGGATTA CCCCGGCGTG
GGTCCGGAGC ATGCGTTTCT GTCCGACAGC GGCCGCGCGG TGTATCAGGG CATTACCGAC
GACGAGGCGA TGGCCGCGTT CCATCTGCTT GCGCATACCG AAGGCATCCT GGCCGCACTT
GAATCCAGCC ATGCGGTGGC GCAGTCGATC AAGCTCGCGC GCGAGCTGCC GAAAGACGCG
TTGGTGTTGT GCAACCTGTC TGGGCGTGGC GACAAGGATG TGCATACCAT CGCGGCGCGC
GAGGGGCTCG CGCTGTAG
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| Protein sequence | MSAQPISDFY AYPDAAGHFG KFGGRFVAET LIGPLQELSA AYDQARQDPS FIAEYDKDLK
HYVGRPSPIY HAERLSREVG GAQILLKRED LNHTGAHKIN NTIGQALLAS RMGKTRIIAE
TGAGQHGVAS ATVAARLGLE CLVYMGATDI ERQKINVYRM KLLGATVIPV TSGSATLKDA
LNEAMRDWVT NVRDTFYIIG TVAGPDPYPR MVRDFNAIVG REARAQMLED YGRLPDAISA
CVGGGSNAIG LFHAFLNDPG VKIYGAEAAG DGIATGRHAA SIAAGRPGVL HGNRTYVICD
DDGQITETHS ISAGLDYPGV GPEHAFLSDS GRAVYQGITD DEAMAAFHLL AHTEGILAAL
ESSHAVAQSI KLARELPKDA LVLCNLSGRG DKDVHTIAAR EGLAL
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