Gene PXO_01264 details

Gene Information

• Locus tag: PXO_01264
• Symbol: fimV
• ID: 6307053
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: -
• Start bp: 3633779
• End bp: 3635755
• Gene Length: 1977 bp
• Protein Length: 658 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 642640800
• Product: FimV
• Protein accession: YP_001914649
• Protein GI: 188577720
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG3170] Tfp pilus assembly protein FimV
• TIGRFAM ID: [TIGR03504] FimV C-terminal domain; [TIGR03505] FimV N-terminal domain

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACAGA GGGGCTGGGG CGCGATGCGT CCGATACAAG GGATAGGTGC GTTGCTGCTG 
ATGGCCTGCA GCGGCGCTGC CGTGGCATTG GGGTTGGGCG ATATCCGGGT GCTGTCCAAG 
CCCGGGCAGC CGCTGGTGGC CGAGATTCCG GTCATCTCCA ACGAGCCGGG CGAACTCGAC 
AACGCGCGCG TGGCGCTGGC ATCGGCCACC ACGTTCGCGC GGGTCGGTCT GGAGCGCCCG 
CAAGGCCTGG TCAGCAATCT GCAGTTCCAG TTTGCGCAGG ACGCACGCGG GCGCGCGGTG 
ATTCGCGTGA CCAGCAGCCA GGCGGTGGAC CAGCCGGTGA TCAACTTCCT GATCGAAGTG 
GAGTGGGGCC AGGGCCGCCT GGTGCGTGGA TATTCCGCCT TGGTCGATGC GCCCGACACC 
GCTGCCGCGA TCGCCGAGCC GGCCATTGAA GCGCCGGGCG CCGGTTCCAG TAATGCCATC 
GCGCGCGAGC CAGCGGCTGC GCCGGTGGCC AACCGCGATG CACAGGGCAC CGCTGGAGGC 
GAGCCGGCGG TACGTGCAGC CGCCAGCGCA CCGCCTGCGT CCGCCACGCG GGCCGGCGAT 
GCATTGCCGG CCGTGCGCTC GGGTCAGACC TTGTCGGAGA TCGCCGCGGT GGTGGCGCGT 
TCCAGCGGGC ATTCGCTGGA CCAGACCATG CTGGCCTTGC TGCGCACCAA TCCGGCTGCC 
TTCATCAACG GCAACATCAA CCGCCTGAAG CAAGGCGCGG TGTTGCGCAC GCCGCAGGAA 
GACGCGCTGG CGCAAGTCGG CGCGGCCGAA GCGGCAGTGA TGGTGCGTGA ACAGGCTGCC 
CAGTGGCGTC AGGCACGCTC GGCGGTGCCG CAACCGGCTG AAGCCGGCGC TGCTGCCGCT 
ACAACCCCGC GACCCGCCAC GCCGGCCGCA ACGGCCGGTG CCGGTGCGCG GCTCGAAATC 
GCCCCTGCAG TGGCGAGTCA GACCAACAAG GCCGGCGTCA CGTCCGGTAC CAGTGCCGAA 
GGCGAGGGCG AGATGGCGGC CAACCAACAG TTGCAACAGG CCAAGGAAGA CATCGCCACC 
CGCGATGCGG AATTGCAGGA CCTGCGTACC CGCGTGGCCG ACCTGGAAAA GCTCAGGCAG 
CAGCAGCAAG CGCTGATCGC AATGAAGGAC ACCGATCTGG CGGCCGCACA GAAGCGCCTG 
TCGGAAGCCC CGGCGGCCGC GCAACAGGGC GGTGGTTTTC CGCTGTGGTT GATCGGTGGG 
CTGGTGTTGA TCGTCGCTGC CGTGGTGGCA TGGTTGGCCG CCCGCCGTCG TAAACCGTCG 
CCGCTGCCGC CGTTGCCGCG CCGGCAGTAC GACTTCGTCC TGCCGGGCGC GCCGGTGCGG 
GCCGCCGAGC CGCAAGACGA GGCGCGGGCC ACGGAGCCGA GCGAGCGCGA TGTGCTGCAG 
GAGACCGAAT TCGAGCAGGC CGATCTGCGC GAAGGCGAGC GTGCCCACGA CATGCACCAA 
CCGTTATCGG ACGTGCTGCG CCGCGAGCCA CTGCTGTCCG AGCCGGCTGC AGCGCCAGCG 
GCGATCAATA GCGACGACCG GCGCGCGCTG CGTGCCACGC CGCCAGTGGT GGTGACAGAG 
CCGCAGCACA TCGCGCCTGA CGAGTCTCCT CAGGACTCGG CGCGCGATTC GCTGCAGGTA 
CACCACGCAG ACATCGCTCC CACGATCAGC GAAGTGCCAT CCGCTGCTCC AGTCGCACCG 
ATCGCCACGC AGGACAGCCT GGATGTCGAC CGCCCGCCTG TGGCACCGAT TGCGGCGCCT 
AATACGACGA CCAGCCGGGA CGTCGGCTCG GCCGGGCGCG ATCGCCTGGA ACTGGCGGTG 
GCCTATATGG ACCTGGGCGA CAAGGACACC GCGCGCGGCT TGCTGCTGGA AGTTGCCGCC 
ACCGGCGACG CCACCACCCG CGCCGAGGCC GCCGAGCTGC TGGAACGGCT GGCATGA 

 

Protein sequence

MKQRGWGAMR PIQGIGALLL MACSGAAVAL GLGDIRVLSK PGQPLVAEIP VISNEPGELD 
NARVALASAT TFARVGLERP QGLVSNLQFQ FAQDARGRAV IRVTSSQAVD QPVINFLIEV 
EWGQGRLVRG YSALVDAPDT AAAIAEPAIE APGAGSSNAI AREPAAAPVA NRDAQGTAGG 
EPAVRAAASA PPASATRAGD ALPAVRSGQT LSEIAAVVAR SSGHSLDQTM LALLRTNPAA 
FINGNINRLK QGAVLRTPQE DALAQVGAAE AAVMVREQAA QWRQARSAVP QPAEAGAAAA 
TTPRPATPAA TAGAGARLEI APAVASQTNK AGVTSGTSAE GEGEMAANQQ LQQAKEDIAT 
RDAELQDLRT RVADLEKLRQ QQQALIAMKD TDLAAAQKRL SEAPAAAQQG GGFPLWLIGG 
LVLIVAAVVA WLAARRRKPS PLPPLPRRQY DFVLPGAPVR AAEPQDEARA TEPSERDVLQ 
ETEFEQADLR EGERAHDMHQ PLSDVLRREP LLSEPAAAPA AINSDDRRAL RATPPVVVTE 
PQHIAPDESP QDSARDSLQV HHADIAPTIS EVPSAAPVAP IATQDSLDVD RPPVAPIAAP 
NTTTSRDVGS AGRDRLELAV AYMDLGDKDT ARGLLLEVAA TGDATTRAEA AELLERLA