Gene PXO_01258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_01258 
Symbol 
ID6307059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand+ 
Start bp3640709 
End bp3641359 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content66% 
IMG OID642640806 
ProductSCO1/SenC superfamily 
Protein accessionYP_001914655 
Protein GI188577726 
COG category[R] General function prediction only 
COG ID[COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCAATC GCAATACCGG CATCGTGCTA CTGGTGGCGC TGGCCGCTGG CCTGGGGCTG 
TTGCTGGGCC AGAAGTTTCT TGGCGACGCG CCCAGTTCGC CGTGGCCGCC CACCAAGACC 
ATCACCTTTT ATCCGCAGCC GCGCCCGTTG CCGCAATTCA GCCTGCGCCA GTCCGACGGC 
ACCCAGCTGG TACCCGGCGA GCTCAACGGG CATTGGACGC TGGTGTTTCT GGGCTTCACC 
TTCTGCCCGG ATGTCTGCCC GACCACCTTG ACCGATCTAG CAGTGGCGCA GCAGCAATGG 
GAAAGCATTC CCGATGGCTT GCGCCCGCGC GTGCTGTTCG TCTCGGTAGA CCCGCAGCGC 
GATCCGCCGG CGCGGCTGGG TGAGTACGCG CACGCCTTCC ACAAGGACAC CCTGGCCGCT 
ACGGCCGATG TGCCGGCGCT GGAGCGCTTT GCCACCGCGC TGGGGTTCGT GTTCAAGAAG 
GTGCCGGGCA AGGGGTATGC GCAGAATCCT AACGACTACA GCATGGATCA TTCGGCCGGC 
ATCGCCGTGC TGGATCCGCA GGGCCGGCTG GCCGGGCTGA TCCGTCCCCC GCTCGACCCG 
AAGGCGATTG CCGCCGACCT CCAACAGCTG ACCAAGGTAA CTGCTCCGTG A
 
Protein sequence
MFNRNTGIVL LVALAAGLGL LLGQKFLGDA PSSPWPPTKT ITFYPQPRPL PQFSLRQSDG 
TQLVPGELNG HWTLVFLGFT FCPDVCPTTL TDLAVAQQQW ESIPDGLRPR VLFVSVDPQR 
DPPARLGEYA HAFHKDTLAA TADVPALERF ATALGFVFKK VPGKGYAQNP NDYSMDHSAG 
IAVLDPQGRL AGLIRPPLDP KAIAADLQQL TKVTAP