Gene PXO_01248 details

Gene Information

• Locus tag: PXO_01248
• Symbol: greB
• ID: 6307066
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: +
• Start bp: 3648395
• End bp: 3648901
• Gene Length: 507 bp
• Protein Length: 168 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 642640813
• Product: transcription elongation factor GreB
• Protein accession: YP_001914662
• Protein GI: 188577733
• COG category: [K] Transcription
• COG ID: [COG0782] Transcription elongation factor
• TIGRFAM ID: [TIGR01461] transcription elongation factor GreB

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCCGCT GGCGCCCACC TGCCGAAAAA AGCACTGCGC TGATCACGCC CGAAGGCCAT 
GCCCGCCTCA AGGCCGAGCT GGACGACTTG TGGCGTGTGC GCCGGCCCGA AGTGGTGCGT 
GCCCTTGCGG CGGCGGCCGC CGAAGGCGAC CGCTCTGAAA ATGCGGAGTA CACCTATCGC 
AAGAAGCAGC TCGGTGAGAT CGATCGGCGT GTGCGCTATC TGAGCAAGCG GCTGGAAGCG 
CTGCGCGTGG TGGATACCGC CCCCACCGAC CCGAATGCGG TGTTCTTCGG AGCGCAGGTG 
GACCTGGAAG ATGCCGACAG TGGTGAGCTG CTGCGCTACC GCATCGTCGG CCCGGACGAG 
ACCGATGCCG GGCGCGGCTG GATCAGCATC GATTCGCCGC TGGCGCGCGC ACTCCTGAAA 
AAGCGCGTGG ACGACGAATT CGACGCGCAC TTGCCGGCAG GCAAGCACAC CTTCGTGGTG 
GTGTCGGTGG ACTACACGAG CCAGTAG 

 

Protein sequence

MSRWRPPAEK STALITPEGH ARLKAELDDL WRVRRPEVVR ALAAAAAEGD RSENAEYTYR 
KKQLGEIDRR VRYLSKRLEA LRVVDTAPTD PNAVFFGAQV DLEDADSGEL LRYRIVGPDE 
TDAGRGWISI DSPLARALLK KRVDDEFDAH LPAGKHTFVV VSVDYTSQ