| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_01242 |
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| Symbol | dcd |
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| ID | 6307072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 3652696 |
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| End bp | 3653265 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642640819 |
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| Product | deoxycytidine triphosphate deaminase |
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| Protein accession | YP_001914668 |
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| Protein GI | 188577739 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0717] Deoxycytidine deaminase |
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| TIGRFAM ID | [TIGR02274] deoxycytidine triphosphate deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCATCA AGAGCGACCG CTGGATCAAG CGCATGGCCG AACAGCACGC GATGATCGCG
CCGTTCGAGC CCGGCCAGAT CAAGCACGAT GCTGCCGGGC AGCGCATCGT CAGTTTCGGC
ACCTCCAGCT ACGGGTACGA CGTGCGCTGC TCGCGCGAGT TCAAGATCTT CACCAACATC
AACTCGACGA TTGTCGACCC GAAGCGCTTC GACCCGGGCA GCTTTGTCGA TGTCGAATCG
GATGTCTGCA TCATCCCGCC GAACAGCTTT GCGCTGGCAC GGACAGTGGA GTACTTCCGC
ATCCCGCGCG ACACGCTGGT GGTGTGCTTG GGCAAGAGCA CCTACGCGCG CTGCGGCATC
ATCGTCAACG TGACCCCGCT GGAGCCGGAG TGGGAAGGCC ACGTCACGCT GGAATTCAGC
AACACCACGC CGCTGCCGGC GCGTATCTAC GCCAACGAAG GCGTGGCGCA GATGCTGTTT
TTCCAGTCCG ACGAAGTCTG CGAAACCTCG TACAAGGACC GCGGCGGCAA GTATCAGGGT
CAGACCGGCG TGACGTTGCC GCGCACGTAA
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| Protein sequence | MSIKSDRWIK RMAEQHAMIA PFEPGQIKHD AAGQRIVSFG TSSYGYDVRC SREFKIFTNI
NSTIVDPKRF DPGSFVDVES DVCIIPPNSF ALARTVEYFR IPRDTLVVCL GKSTYARCGI
IVNVTPLEPE WEGHVTLEFS NTTPLPARIY ANEGVAQMLF FQSDEVCETS YKDRGGKYQG
QTGVTLPRT
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