Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_01240 |
Symbol | |
ID | 6307074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 3654677 |
End bp | 3655426 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642640821 |
Product | transposase |
Protein accession | YP_001914670 |
Protein GI | 188577741 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2826] Transposase and inactivated derivatives, IS30 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.839107 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCTGCGT CGGTTTACCA GATCACCACG CGGTCTTTCT CGGGCCGCAC CATGGACTTC AGTCCCGAAC AGATTGCCGG TCGCACCGGC TTGGCCAGTC ACGCATGTAT CTATCGGCAC ATCGACGCCG ATCAGAAGCG CGGTGGTCAG TTGTTCATGC ATCTACGCAA ACGCCGCCGC AAGCGCCGTC GGCGTGGCGT GCGCGATGGC CGCGGGCAGC TGACGCATCG GCGCAGCTGG ACACAGCGCC CCAGTGTGGT TGAGCAGCGA AGCCGTATCG GCGACTGGGA GCTGGAGACC ATCAGGGCCT CGCACGGAAA GGGCGTGGTG GTCAGCATGA CCGAACGCCG CAGTCGCCTG CATCTGCTGG CTTACTCGCC CGACGGCACC GCCGAGAACG TGCGCAACGC CATTGTCCAG CGACTGGGTG GCCTACGCCA TGCAGTTCAC ACGCTCACCG CCGACAACGG CAAGGAGTTC GCCGATCATC GGCTCATTGC CGCATGCCTG CAGAGCGATT TCTATTTCGC AGATCCGTAC TGCCCATGGC AGCGCGGCAG CAACGAGAAT GCCAACGGAT TGACACGCCA ATACCTGCCA CGACAGGCCG ATGTCAGCAC CATCACCGAT GCGCACCTGC GATGGATCGA GCCGCGGCTC TACAATAGTC CGCGCAAGAT ACTTGGATTC AAAACGCCCC TCGAAGTCTT CACCGAGGAG GTCCTCAACA GCGTTGCGAA TCGGAGTTGA
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Protein sequence | MAASVYQITT RSFSGRTMDF SPEQIAGRTG LASHACIYRH IDADQKRGGQ LFMHLRKRRR KRRRRGVRDG RGQLTHRRSW TQRPSVVEQR SRIGDWELET IRASHGKGVV VSMTERRSRL HLLAYSPDGT AENVRNAIVQ RLGGLRHAVH TLTADNGKEF ADHRLIAACL QSDFYFADPY CPWQRGSNEN ANGLTRQYLP RQADVSTITD AHLRWIEPRL YNSPRKILGF KTPLEVFTEE VLNSVANRS
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