| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_01234 |
|---|
| Symbol | |
|---|
| ID | 6306375 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | + |
|---|
| Start bp | 2941551 |
|---|
| End bp | 2942546 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642640131 |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_001913988 |
|---|
| Protein GI | 188577059 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG0640] Predicted transcriptional regulators
[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.250381 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATCTGG AAGACTGGTC GGCCCGCTTG AAGGTATTCG CCGACGCCAC CCGAGTCCGC
CTGCTGGCCT TGCTGGAGCA GGAAGAACTC ACCGTGGCCG AGCTGTCGGC CATTACCCGG
CTGGCGCAGC CGCGCGTGTC CACGCATCTG GCCAAACTGA AGGAAGCCGG GCTGGTGCGC
GACCGTCGCG CTGGCGTGTC GGCGTATTAC CGCTTCGACG AAGTGTCGCT GGACCCGGCA
CAGCGTGCGC TATGGCTGGC ACTGAGCACC GGCAGCGACG ACCCCTTGCT GCGCCAGGAC
GCCGAGCGCG TGGCAGCGGT GCTGGCCAAC CGCGCCGCCG ACCAGAATTG GGCCGATTCG
GTGGCCGGCG ACATGGAGCG GCATTACTCG CCCGGACGCA CCTGGGAGGC CTTGGCGCGC
ACCGCCCTGC CACTGCTGGA AACCGGCGAC GTGCTCGACA TCGCCTCCGG CGACGGCGTG
CTGGCCGAAC TGGTGGCGCC GCACGCCACC CGCTACATCT GCATCGACAC CAGCGCGCGC
GTGGTCGCTG CCGCCAGCGA GCGCCTGCGC AAATTGCGCA ACGTGGAAGT GCGCGAAGGC
GACATGCATG CGCTGCCGTT CCCCGATGCC AGCTTCGACC TGGTGGTGCT GATGCATGCG
CTCACCTACG CGGCCAAGCC GGCGCAGGCA GTGGCCGAAT CGGCGCGCGT GTTGCGCCCC
GGCGGCCGGC TACTGCTGTG CAGCCTGGCC AAGCACGAAC ATCGCGCTGC AGTGCATGCG
TACGGCCATG TCAATCTCGG ATTCGCCGCC AAGGAATTGC GCAAGTTCGC CGAGAAAGCC
GGGCTGGATG TCTCCAGTCT GGAGACGGTG ACGCGCGAGA AACGCCCGCC ACATTTCGAA
GTGATCTCGC TCATCGCGAT GAAGCCCGGC ATGGGGAGTC GGGATTCGGG ATTGGTGGAA
AACAAAGACA CCGCTGCGCG GAGAACCGGA CCATGA
|
|---|
| Protein sequence | MDLEDWSARL KVFADATRVR LLALLEQEEL TVAELSAITR LAQPRVSTHL AKLKEAGLVR
DRRAGVSAYY RFDEVSLDPA QRALWLALST GSDDPLLRQD AERVAAVLAN RAADQNWADS
VAGDMERHYS PGRTWEALAR TALPLLETGD VLDIASGDGV LAELVAPHAT RYICIDTSAR
VVAAASERLR KLRNVEVREG DMHALPFPDA SFDLVVLMHA LTYAAKPAQA VAESARVLRP
GGRLLLCSLA KHEHRAAVHA YGHVNLGFAA KELRKFAEKA GLDVSSLETV TREKRPPHFE
VISLIAMKPG MGSRDSGLVE NKDTAARRTG P
|
|---|
| |