Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_01232 |
Symbol | metH |
ID | 6306377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 2943825 |
End bp | 2946578 |
Gene Length | 2754 bp |
Protein Length | 917 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642640133 |
Product | methionine synthase |
Protein accession | YP_001913990 |
Protein GI | 188577061 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1410] Methionine synthase I, cobalamin-binding domain |
TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain [TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0491653 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCACTC CCCGCTACAC CCGTCTGTCC GGCCTTGAGC CGTTGGTCAT TACGCCAGAC CTGTTATTCG TCAACGTCGG CGAGCGCACC AACGTCACCG GCAGTGCGCA ATTTCGCAAG CTGATCAAGG AAGAACGCTA CGAGGAAGCG GTGGAGGTCG CACGTCAGCA GGTGGACAGC GGCGCGCAGA TCCTCGACGT CAACATGGAC GAGGGCCTGA TCGATTCGGA AAAAGCCATG ACGCGCTTTC TCAATCTGAT CATGTCCGAA CCGGATATCG CACGCATTCC GGTGATGGTG GATTCGTCCA AGTGGAGCGT GATCGAAGCC GGATTGAAAT GCCTGCAAGG CAAGAGCGTG GTGAACTCCA TCTCGCTCAA GGAAGGCGAA GCGGTGTTCG TCGAACACGC GCGCAAGGTG CTGCGCTACG GTGCCGCCGC GGTGGTCATG GCCTTCGACG AAGCGGGCCA GGCCGACACC TGCGCACGCA AGGTCGAGAT TTGCACGCGC GCCTACAAGG TGCTCACCGA GCAAGTGGGT TTTCCGCCGG AAGACATCAT CTTCGACCCG AACATCTTTG CCGTGGCCAC CGGCATCGAG GAACACGACA ACTATGCGGT GGACTTCATC GAAGCCACCC GTCTCGTCAA GAACACGCTG CCGCATTGCC ATGTGTCCGG CGGCGTTTCC AACGTGTCGT TTTCGTTTCG TGGCAACGAA ACAGTACGCC AGGCGATCCA CTCGGTGTTC CTGTTCCATG CGATCAAGGC TGGCATGGAC ATGGGCATCG TCAACGCCGG CGGCATGCCG ATCTATGACG AGCTGGATCC GGAATTGCGC GAACGCGTGG AAGACGTGAT CCTCAACCGA CGCAAGGACG GCACCGAGCG CCTGCTGGAA ATCGCCGAGC GCTACAAGGG CACCAAAGGC GCGGCGAGAG TTGAAGACCT GGCCTGGCGC GACAAACCGG TCCGCGCGCG CTTGGCGCAT GCGCTGGTGC ACGGCATCGA CGCATTTGTG GAAACCGATA CCGAAGAAGC GCGCCAGCAA TCCACACGCC CACTGGACGT GATCGAAGGT CCATTAATGG ACGGCATGAA CGTGGTCGGC GATCTGTTCG GCGCCGGCAA GATGTTCCTG CCGCAGGTGG TCAAATCCGC GCGCGTGATG AAAAAAGCGG TGGCGTACCT GCTGCCGTAC ATCGAAGCGG AAAAATTGCG TACCGGCGAT AGCGGCAAGT CCAACGGCAA GATCATCATG GCCACCGTCA AGGGCGATGT GCACGACATC GGCAAGAACA TCGTCGGCGT GGTGTTGGCG TGCAACAACT TCGATGTCGT GGATCTGGGC GTGATGGTGT CGGCGCAGCT GATCCTTGAC CGTGCGCGCG AAGAGAATGC AGACCTGATC GGCTTGTCCG GCTTGATCAC GCCCTCGCTG GAAGAGATGT CGCACGTCGC ACGCGAGATG CAGCGACAAG GCTTCGACAT TCCGTTGTTG ATTGGCGGCG CCACCACCTC ACGCGCGCAC ACGGCATTGA AGATCGACCC GCACTACAGC GCGCCCACGG TCTGGGTGAA GGATGCCTCG CGGGCGGTGG GCGTGGCGCA ATCGCTGATT TCGCGCGACC TGCGCCAGGC CTTCGTTACC GCCAACGATG CGGATTACGC GGAAATCCGC GCACGCCACC GCAACCGCGG CGATGCCAAG CGCTTGGTGT CGCTGGAAAA AGCCCGTGCG CAGCGCTTCG ATGGCGACTG GGACACCTAC ACGCCGCCTG CCCCGCGACA GCCGGGCATC CACGTGTTCG ATGACTACCC GCTGCAGGAG CTCATCGACC TTATCGACTG GACGCCATTC TTCCAGGCCT GGGAGCTGGC CGGTAAATTC CCGGCAATCC TCAGCGACGA GATCGTCGGC ATCCAGGCCA GCGAGCTGTA TCGCGACGCA CGCCGCATGC TCAAGCGCAT CGTCGACGAA AAGTGGCTCA CGGCCAAGGC CGTGTTCGGG CTATGGCCGG CGAACAGTGT CGGAGATGAT GTCGTCGTCC TGACCGAACC GGCGGAATCG GGAGTCAGGA ATCGGGAATC GCCAAGCGAT GCCCCCGCGC TCGACCATTC CCGATTCTCC ATTCCCCATT CCTTGCATTT TTTGCGCCAG CAAGTCGACA AACCCGTCGA CCGCCCCGAC TTCTGCCTGG CCGATTTCAT CGCGCCGAAA AGCAGCGGCA AACGGGACTG GATCGGTGCA TTCGCGGTCA CTGCAGGCAT CGGCATCGAC CCGCATGTGG CCCGTTTCGA AGCCGCGCAC GACGACTACA ACTCCATCCT GCTCAAGGCG TTGGCCGACC GTCTGGCCGA AGCATTGGCC GAGCGCCTGC ATCAACGCGT GCGTACCGAA TTCTGGGCCT ATGTCGACGA CGAAACACTC GACAACGAAG CCCTGATCGC CGAGCGCTAT CGCGGCATTC GCCCGGCTCC CGGCTACCCG GCCTGCCCGG AACACAGCGA AAAACGCACC TTGTTCGATC TGCTCGATGC AGAGCGCAAC GCCGACATGT CGCTGACCGA AAGTTTCGCG ATGCTGCCCA CCGCCGCGGT CTCCGGCTAT TACTTCAGCC ATCCCAAAAG CCAGTACTTC GTGGTCGGGC GACTGGGCAA GGAACAGGTG GCCGATTACG CAAAGCGCAA GGGCATCACG CTGGCATTGG CCGAACGGCA TCTAGCGTCC AACCTGGATT ACGACCCGGA ATAA
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Protein sequence | MSTPRYTRLS GLEPLVITPD LLFVNVGERT NVTGSAQFRK LIKEERYEEA VEVARQQVDS GAQILDVNMD EGLIDSEKAM TRFLNLIMSE PDIARIPVMV DSSKWSVIEA GLKCLQGKSV VNSISLKEGE AVFVEHARKV LRYGAAAVVM AFDEAGQADT CARKVEICTR AYKVLTEQVG FPPEDIIFDP NIFAVATGIE EHDNYAVDFI EATRLVKNTL PHCHVSGGVS NVSFSFRGNE TVRQAIHSVF LFHAIKAGMD MGIVNAGGMP IYDELDPELR ERVEDVILNR RKDGTERLLE IAERYKGTKG AARVEDLAWR DKPVRARLAH ALVHGIDAFV ETDTEEARQQ STRPLDVIEG PLMDGMNVVG DLFGAGKMFL PQVVKSARVM KKAVAYLLPY IEAEKLRTGD SGKSNGKIIM ATVKGDVHDI GKNIVGVVLA CNNFDVVDLG VMVSAQLILD RAREENADLI GLSGLITPSL EEMSHVAREM QRQGFDIPLL IGGATTSRAH TALKIDPHYS APTVWVKDAS RAVGVAQSLI SRDLRQAFVT ANDADYAEIR ARHRNRGDAK RLVSLEKARA QRFDGDWDTY TPPAPRQPGI HVFDDYPLQE LIDLIDWTPF FQAWELAGKF PAILSDEIVG IQASELYRDA RRMLKRIVDE KWLTAKAVFG LWPANSVGDD VVVLTEPAES GVRNRESPSD APALDHSRFS IPHSLHFLRQ QVDKPVDRPD FCLADFIAPK SSGKRDWIGA FAVTAGIGID PHVARFEAAH DDYNSILLKA LADRLAEALA ERLHQRVRTE FWAYVDDETL DNEALIAERY RGIRPAPGYP ACPEHSEKRT LFDLLDAERN ADMSLTESFA MLPTAAVSGY YFSHPKSQYF VVGRLGKEQV ADYAKRKGIT LALAERHLAS NLDYDPE
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