Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_01197 |
Symbol | sucB |
ID | 6306412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 2976675 |
End bp | 2977877 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642640168 |
Product | dihydrolipoamide succinyltransferase |
Protein accession | YP_001914025 |
Protein GI | 188577096 |
COG category | [C] Energy production and conversion |
COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCACCG AAGTCAAAGT TCCGGTACTG CCCGAATCCG TTTCCGACGC CACCATCGCC AGCTGGCACA AGAAGCCCGG CGAAGCGGTC AAGCGCGACG AGAATCTGGT CGACCTGGAA ACCGACAAGG TCGTGTTGGA AGTTCCGTCG CCGGTCGACG GCGTACTGAA GGAAATCAAG TTCGAAGCCG GCAGCACGGT CACCAGCAAC CAGATTCTGG CGATCATCGA AGAAGGCGCT GTGGCTGCGG CTGCACCGGC GGACGAGAAG AAGGCCGCCG CACCGGCAGC AGCAGCTCCA GCTGCCGCGC CGGCTGCCGC CGCTGCACCG GCGCCTGCGT CCAAGTCTGC TGCCGATTCC CTGCCGCCGG GTGCGCGTTT CTCTGCGATC ACCCAGGGTG TGGATCCGTC GCAGGTCGAG GGCACAGGCC GTCGTGGCGC GGTGACCAAG GAAGACATCG TCAACTTCGC CAAGGCCGGC GGCGTGGGCA AGGCCTCGGG CGCCCGCCCG GAAGAGCGCG TGCCGATGAC CCGCGTGCGC AAGACGATTG CCAAGCGCCT GATGGAGTCC AAGAACTCCA CCGCGATGCT GACCACCTTC AACGAGGTCA ACCTGGCCAA GGTATCGGCC GCACGCAAGG AACTGCAGGA CGAATTCCAG AAGGCGCACG GCATCAAGCT CGGTTTCATG AGCTTCTTCG TCAAGGCCGC CGCCAACGCG CTGCAGCGCT TCCCGCTGGT CAACGCCTCG ATCGACGGCG ACGACATCAT CTATCACGGC TACAGCGACA TCTCGATCGC GGTGTCGACC GACAAGGGCC TGGTCACGCC GGTGCTGCGT AACGTTGAGC GCCAGTCGTT CGCCGATGTC GAACAGGGCA TCGCCGATTA CGCCGCCAAG GCACGCGCCG GCAAGCTGGG CCTGGATGAC CTGCAGGGCG GCACCTTTAC CATCACCAAT GGCGGCACCT TCGGCTCGCT GCTGTCCACC CCGATCATCA ACCCGCCGCA GAGCGCCATC CTGGGCATGC ACACGATCAA GGAACGCCCG ATCGCCGAGA ATGGCCAGGT CGTGATCGCC CCGATGATGT ATCTGGCGCT GTCTTACGAC CACCGCATCA TCGATGGCAA GGATTCGGTG CAGTTCCTGG TCGACATCAA GAACCAGCTG GAAAACCCGG GCCGCATGCT GTTCGGTCTG TAA
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Protein sequence | MATEVKVPVL PESVSDATIA SWHKKPGEAV KRDENLVDLE TDKVVLEVPS PVDGVLKEIK FEAGSTVTSN QILAIIEEGA VAAAAPADEK KAAAPAAAAP AAAPAAAAAP APASKSAADS LPPGARFSAI TQGVDPSQVE GTGRRGAVTK EDIVNFAKAG GVGKASGARP EERVPMTRVR KTIAKRLMES KNSTAMLTTF NEVNLAKVSA ARKELQDEFQ KAHGIKLGFM SFFVKAAANA LQRFPLVNAS IDGDDIIYHG YSDISIAVST DKGLVTPVLR NVERQSFADV EQGIADYAAK ARAGKLGLDD LQGGTFTITN GGTFGSLLST PIINPPQSAI LGMHTIKERP IAENGQVVIA PMMYLALSYD HRIIDGKDSV QFLVDIKNQL ENPGRMLFGL
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