| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_01196 |
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| Symbol | lpdA |
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| ID | 6306413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 2978119 |
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| End bp | 2979555 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642640169 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_001914026 |
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| Protein GI | 188577097 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.738792 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGAAA ACTACGACGT CGTCGTCATC GGTGCTGGCC CGGCCGGCTA TCACGCGGCG
ATTCGCGCGG CCCAGCTGGG CATGAAGGTC GCCTGCATCG ACGCGGCACT CGGCAAGGAC
GGCAAGCCCG CGCTGGGCGG CACCTGCCTG CGTGTGGGTT GCATTCCATC CAAGGCGCTG
CTGGATTCCT CGCGCCAGTT CTGGAACATG GGTCACCTGT TCGGCGACCA CGGCATCAGC
TTCAACGATG CCAAGATGGA CGTGCCCACC ATGATCGGCC GCAAGGACAA GATCGTGAAG
CAGTTCACCG GCGGCATCGC GATGCTGTTC AAGGCCAACA AGATCACGCC GTACTACGGC
TTCGGCCAGC TGCAGCCGGG CAACATCGTC AAGGTCACCC AGCACGAAGG AGGCGAGATC
GCGCTCAAGG GCACAAACGT GATCCTGGCG GCCGGTTCGG AATCGATCGA ACTGCCGTTC
GCCAAGTTCG ATGGCGACAC CATCGTCGAC AACGTCGGCG GCCTGGATTT CACCGCCGTT
CCCAAGCGTC TGGCCGTCAT CGGCGCCGGC GTCATCGGCC TGGAGCTGGG CAGCGTGTGG
AAGCGTCTGG GTGCCGAAGT CACCATTCTC GAAGCGTTGC CGGACTTCCT GGCGCTGACC
GATGCCGAAG TGGCCAAGAC CGCACTGAAG GAATTCAAGA AGCAGGGTCT GGACATCAAG
CTGGGCGCCA AGGTCGGCAA GACCGAGATC ACCGGCAGCG GCGATGCCAA GCAGGTGTTG
CTGAGCTACA CCGACGCCGC TGGCGAGCAG ACCCTGACCG TGGACAAGCT GCTGGTGGCC
GTGGGCCGCA AGGCTGCCAC CAAGAACCTG CTGGCCGAAG GTACGGGCGT CAAGGTCACC
GACCGCGGCC AGATCGAGGT CGACGGGCAT TGCCACACCG GTGTCGATGG CGTGTGGGCG
ATCGGCGACT GCGTGCGCGG CCCGATGCTG GCACACAAGG GCTTCGAGGA AGGCATCGCG
GTGGCGGAGC TGATCGCCGG CCTGCCCGGT CACGTCAACT TCGACACCAT TCCGTGGGTC
ATCTATACCG AACCGGAGAT TGCCTGGGTC GGCAAGACCG AGCAGCAGTT GAAGGCCGAA
GGCGTTGCCT ACAAGGCCGG CAGCTTCCCG TTCGCGGCGA TCGGCCGTGC GGTGGCCATG
GGCGAGCCGG CTGGCTTCGT CAAGGTGATC GCCGATGCCG AAACCGACCG CGTGCTGGGC
ATGCACCTGG TCGGCGTGGG CGTGTCCGAG CTGGTGCACG AAGGTGTGCT GACGATGGAA
TTCAACGGCT CCGCCGACGA CCTCGCCCGC ATCTGCCACG CGCATCCGAC GCTCTCCGAA
GCGATCCACG ATGCCGCGAT GGCGGTGAGC AAGCGCGCGA TTCATAAGGC CAACTAA
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| Protein sequence | MAENYDVVVI GAGPAGYHAA IRAAQLGMKV ACIDAALGKD GKPALGGTCL RVGCIPSKAL
LDSSRQFWNM GHLFGDHGIS FNDAKMDVPT MIGRKDKIVK QFTGGIAMLF KANKITPYYG
FGQLQPGNIV KVTQHEGGEI ALKGTNVILA AGSESIELPF AKFDGDTIVD NVGGLDFTAV
PKRLAVIGAG VIGLELGSVW KRLGAEVTIL EALPDFLALT DAEVAKTALK EFKKQGLDIK
LGAKVGKTEI TGSGDAKQVL LSYTDAAGEQ TLTVDKLLVA VGRKAATKNL LAEGTGVKVT
DRGQIEVDGH CHTGVDGVWA IGDCVRGPML AHKGFEEGIA VAELIAGLPG HVNFDTIPWV
IYTEPEIAWV GKTEQQLKAE GVAYKAGSFP FAAIGRAVAM GEPAGFVKVI ADAETDRVLG
MHLVGVGVSE LVHEGVLTME FNGSADDLAR ICHAHPTLSE AIHDAAMAVS KRAIHKAN
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