Gene PXO_01185 details

Gene Information

• Locus tag: PXO_01185
• Symbol: dnaK
• ID: 6306424
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: -
• Start bp: 2990850
• End bp: 2992775
• Gene Length: 1926 bp
• Protein Length: 641 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 642640180
• Product: molecular chaperone DnaK
• Protein accession: YP_001914037
• Protein GI: 188577108
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR02350] chaperone protein DnaK

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.0550021
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGCAAGA TCATTGGTAT TGACCTCGGC ACCACGAACT CGTGCGTGTC GATCATGGAC 
GGCGGCAAGG CCCGCGTCAT CGAAAACTCC GAGGGCGATC GCACCACGCC CTCGATCGTC 
GCCTACACCA AGGACGGCGA AGTGCTGGTA GGCGCCTCGG CCAAGCGCCA GGCGGTGACC 
AACCCGAAGA ACACCTTCTA CGCGGTGAAG CGCCTGATCG GCCGCAAGTT CACCGACGCC 
GAAGTGCAGA AGGACATCTC GCACGTGCCG TACGGCATCC TGGCGCACGA CAACGGCGAC 
GCCTGGGTGC AGACCAGCGA TGCCAAGCGC ATGGCGCCGC AGGAAATCTC CGCACGCGTG 
CTGGAGAAAA TGAAGAAGAC CGCGGAAGAC TACCTCGGCG AGAAGGTCAC CGAAGCGGTG 
ATCACGGTGC CGGCGTACTT CAACGACAGC CAGCGTCAGG CCACCAAGGA CGCTGGCCGC 
ATCGCCGGTC TGGACGTCAA GCGCATCATC AACGAGCCGA CCGCCGCAGC ACTGGCTTAT 
GGCCTGGACA AGAAGGGCGG CGACCGCAAG ATTGCGGTGT ACGACCTGGG CGGCGGCACC 
TTCGACGTGT CGATCATCGA GATCGCTGAA GTCGATGGCG AAAAGCAGTT CGAAGTGCTG 
GCTACCAACG GCGATACCTT CCTGGGCGGC GAAGACTTCG ACAACCGCGT CATCGAGTAC 
CTGGTCGATG AGTTCAACAA GGACCAGGGC ATCGACCTGC GCAAGGATCC GCTCGCGTTG 
CAGCGCCTGA AGGACGCCGC AGAGCGCGCC AAGATCGAGC TGTCGTCCAG CCAGCAGACC 
GAAGTCAATC TGCCGTACGT CACCGCCGAT GCGTCGGGCC CGAAGCACCT CAACATCAAG 
TTGACCCGTG CCAAGCTCGA AGCGCTGGTG GAAGACCTGG TCAAGAAGTC GATCGAGCCG 
TGCCGCACCG CGTTGAACGA CGCCGGCCTC CGCGCCAGCG ACATCAACGA AGTGATCCTG 
GTCGGCGGTC AGACCCGCAT GCCGAAGGTG CAGCAGGCGG TTGCCGATTT CTTCGGCAAG 
GAACCGCGCA AGGATGTCAA CCCGGACGAA GCCGTGGCCG TGGGTGCTGC GATTCAGGGC 
GGCGTGCTGG CCGGCGACGT CAAGGACGTG CTGCTGCTGG ACGTGACCCC GCTGTCGCTG 
GGTATCGAAA CCATGGGCGG CGTGTTCACC AAGATCATCG AAAAGAACAC CACCATCCCG 
ACCAAGGCTT CGCAGACCTT CTCCACCGCC GAAGACAACC AGTCGGCCGT GACCGTGCAC 
GTGTTGCAGG GTGAGCGCGA GCAGGCCCGC TTCAACAAGT CGCTGGCCAA GTTCGACCTG 
TCCGGCATCG AGCCGGCCCC GCGTGGCATG CCGCAGGTGG AAGTGTCCTT CGACATCGAC 
GCCAACGGCA TCCTGCACGT GTCGGCCAAG GACAAGAAGA CCAACAAGGA ACAGAAGGTC 
GAGATCAAGG CCGGTTCGGG TCTGTCGGAT GAAGAGATCC AGCGTATGGT CGCCGACGCG 
GAAGCCAACC GCGAAGAAGA CAAGAAGTTC CATGAGCTGG TGCAGGCACG CAACCAGGCC 
GATGGCCTGA TCCATGCCAC CCGCACCGCG ATCACCGAGC ATGGCAGCAA GGTCGGTGGC 
GATGTGATCG GCAAGGTGGA AGCGGCGCTG TCGGATCTGG AGACCGCCAT GAAGGGCGAC 
GACAAGGCGC AGATCGAAGC ACGCACCAAG ACGTTGGAAG AAGCCGGCCA GTCGCTGTAC 
GCCGCAGCTG CGGCAGCAGA GCAGGGCGGC AGCGCCGATG CCGCCAGCGG TAACGCGCAG 
GCGTCCAAGG CCGCCGATGA CGTGGTGGAC GCCGAGTTCA CCGAAGTCAA GGACGACAAG 
AAGTAA 

 

Protein sequence

MGKIIGIDLG TTNSCVSIMD GGKARVIENS EGDRTTPSIV AYTKDGEVLV GASAKRQAVT 
NPKNTFYAVK RLIGRKFTDA EVQKDISHVP YGILAHDNGD AWVQTSDAKR MAPQEISARV 
LEKMKKTAED YLGEKVTEAV ITVPAYFNDS QRQATKDAGR IAGLDVKRII NEPTAAALAY 
GLDKKGGDRK IAVYDLGGGT FDVSIIEIAE VDGEKQFEVL ATNGDTFLGG EDFDNRVIEY 
LVDEFNKDQG IDLRKDPLAL QRLKDAAERA KIELSSSQQT EVNLPYVTAD ASGPKHLNIK 
LTRAKLEALV EDLVKKSIEP CRTALNDAGL RASDINEVIL VGGQTRMPKV QQAVADFFGK 
EPRKDVNPDE AVAVGAAIQG GVLAGDVKDV LLLDVTPLSL GIETMGGVFT KIIEKNTTIP 
TKASQTFSTA EDNQSAVTVH VLQGEREQAR FNKSLAKFDL SGIEPAPRGM PQVEVSFDID 
ANGILHVSAK DKKTNKEQKV EIKAGSGLSD EEIQRMVADA EANREEDKKF HELVQARNQA 
DGLIHATRTA ITEHGSKVGG DVIGKVEAAL SDLETAMKGD DKAQIEARTK TLEEAGQSLY 
AAAAAAEQGG SADAASGNAQ ASKAADDVVD AEFTEVKDDK K