Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_01180 |
Symbol | |
ID | 6306429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 2997327 |
End bp | 2997722 |
Gene Length | 396 bp |
Protein Length | 131 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642640185 |
Product | outer membrane protein |
Protein accession | YP_001914042 |
Protein GI | 188577113 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2913] Small protein A (tmRNA-binding) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0407548 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTAATC TCCTGCTGGT CGCCGCCGTT GCTCTTTCCA CCGCTGGCTG CGGCATTATC TACAAGCAGC CGATCTACCA GGGCAATCTG ATCAAACAGA CCGCCGTGGA GCAACTGCAG GTAGGCCAGA GCAAGCAGCA GGTCAGCGCA TTGCTGGGCA CCCCCTCGAT TCCAGACCCG TTCCACGCCC AGCGCTGGGA CTACACCTCC ACGCAGCGTG TGGATCGTCT GGCGCACACC GAGGTCAAGA ACTTCACCGT GTTCTTCGAG AACGAGCAAG TTGTGCGCTG GGAAGGCGAC TATTTCCCGT CGCAGGACGA GCAGCTGGCC AAATCCGCAC CCAAGCAGTT CGGCCGCAAC CTGGCACGCG ACAAGAAGAA GCAGCGCGGC CGTTGA
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Protein sequence | MRNLLLVAAV ALSTAGCGII YKQPIYQGNL IKQTAVEQLQ VGQSKQQVSA LLGTPSIPDP FHAQRWDYTS TQRVDRLAHT EVKNFTVFFE NEQVVRWEGD YFPSQDEQLA KSAPKQFGRN LARDKKKQRG R
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