Gene PXO_01180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_01180 
Symbol 
ID6306429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp2997327 
End bp2997722 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content61% 
IMG OID642640185 
Productouter membrane protein 
Protein accessionYP_001914042 
Protein GI188577113 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2913] Small protein A (tmRNA-binding) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0407548 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTAATC TCCTGCTGGT CGCCGCCGTT GCTCTTTCCA CCGCTGGCTG CGGCATTATC 
TACAAGCAGC CGATCTACCA GGGCAATCTG ATCAAACAGA CCGCCGTGGA GCAACTGCAG
GTAGGCCAGA GCAAGCAGCA GGTCAGCGCA TTGCTGGGCA CCCCCTCGAT TCCAGACCCG
TTCCACGCCC AGCGCTGGGA CTACACCTCC ACGCAGCGTG TGGATCGTCT GGCGCACACC
GAGGTCAAGA ACTTCACCGT GTTCTTCGAG AACGAGCAAG TTGTGCGCTG GGAAGGCGAC
TATTTCCCGT CGCAGGACGA GCAGCTGGCC AAATCCGCAC CCAAGCAGTT CGGCCGCAAC
CTGGCACGCG ACAAGAAGAA GCAGCGCGGC CGTTGA
 
Protein sequence
MRNLLLVAAV ALSTAGCGII YKQPIYQGNL IKQTAVEQLQ VGQSKQQVSA LLGTPSIPDP 
FHAQRWDYTS TQRVDRLAHT EVKNFTVFFE NEQVVRWEGD YFPSQDEQLA KSAPKQFGRN
LARDKKKQRG R