Gene PXO_01177 details

Gene Information

• Locus tag: PXO_01177
• Symbol: smpB
• ID: 6306432
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: +
• Start bp: 2998850
• End bp: 2999353
• Gene Length: 504 bp
• Protein Length: 167 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 642640188
• Product: SsrA-binding protein
• Protein accession: YP_001914045
• Protein GI: 188577116
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 0.130797
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCAAGA AACCCACCAA GGATAAAGCA AACGGCGCGA AGGCCACGAA AACCATCGCG 
TTGAACAAGC GTGCGCGCCA CGAATACCAC CTGGAAGAAC GCTACGAAGC TGGTCTGGCG 
CTGCAGGGCT GGGAAATCAA GGCGATCCGC GCCGGCCGCG CCAACATCGT CGACGGTTAC 
GCCTATGTCC GCTCCGGCGA GATCTATTTG ATCGGCGCGC AGATTACCCC GCTGATTCAG 
GCATCCACCC ACACCGTGCC GGTGGAACGC CGCGACCGCA AACTGCTGCT GCACCGGGCC 
GAGATCGACA AGGTACTCAC CCGCGTGGAG CGCGAGGGCT ACACCCTGGT GCCCACCGCG 
CTGTACTGGA GCAGCAACAA GGTCAAGCTG GAAATCGCCC TGGCCAAGGG CAAGCAGAAT 
CACGACAAGC GCGATGCCGC CAAGGAGCGC GACTGGCAGC GCGACAAGCA GCGCGTGATG 
CGGCGGCATA ACCGCGATGC GTGA 

 

Protein sequence

MSKKPTKDKA NGAKATKTIA LNKRARHEYH LEERYEAGLA LQGWEIKAIR AGRANIVDGY 
AYVRSGEIYL IGAQITPLIQ ASTHTVPVER RDRKLLLHRA EIDKVLTRVE REGYTLVPTA 
LYWSSNKVKL EIALAKGKQN HDKRDAAKER DWQRDKQRVM RRHNRDA