Gene PXO_01161 details

Gene Information

• Locus tag: PXO_01161
• ID: 6306449
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: +
• Start bp: 3009787
• End bp: 3010434
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 642640204
• Product: transposase
• Protein accession: YP_001914061
• Protein GI: 188577132
• COG category: [L] Replication, recombination and repair
• COG ID: [COG2801] Transposase and inactivated derivatives

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCGCCGTT GCTGCGGCCC ACCAAGGCCA ACCAAGGCCA ACCAGGTGTG GTCGATGGAC 
GTCGTGTTCG ACCGCACCGC CGAAGGCAGG GCAATCAAAT GCCTGGTGAT CGTGGACGAC 
GCAACCCACG AAGCGGTCGC CATCGACGTG GAGCGTGCGA TCTCGGGACA CGGCGTTGTG 
CGCGTGCTGG ATCGGTTGGC ACACAGTCGT GGCCTGCCGA AGATGATCCG CACGGACAAT 
GGCAAGGAGT TCTGTGGCAA GGCCATGGTC GCCTGGGCGC ATGCCAATCG TGTGCAGCTA 
CGCCAGATCC AGCCTGGCAA GCCGAACCAG AATGCCTACG TCGAATCCTT CAACGGCCGG 
CTACGCGACG AATGCCTCAA CGAACACTGG TTCCCAACGC TGCTGCATGC GCGCACCGAG 
ATCGAACGCT GGCGCCGCGA ATACAACGAA CACCGCCCCA AAAAAACAAT CGGCGGAATG 
ACGCCGGCGG CCTATGCCCA GCAGTTGGCC AATAGCGATA TCATCAACCC CGGACTCGAA 
ACCCGACTGC TACTCAGGAT GGGGGGACGT CGCTCCATCC TCTCAAGAGT TGGAGCCTCC 
GGGAATCACG GAGCGGTTCA ATGCCAGCCA AGCGCGCTGC GTCAATGA 

 

Protein sequence

MRRCCGPPRP TKANQVWSMD VVFDRTAEGR AIKCLVIVDD ATHEAVAIDV ERAISGHGVV 
RVLDRLAHSR GLPKMIRTDN GKEFCGKAMV AWAHANRVQL RQIQPGKPNQ NAYVESFNGR 
LRDECLNEHW FPTLLHARTE IERWRREYNE HRPKKTIGGM TPAAYAQQLA NSDIINPGLE 
TRLLLRMGGR RSILSRVGAS GNHGAVQCQP SALRQ