Gene PXO_01157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_01157 
Symbol 
ID6306453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp3012670 
End bp3014175 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content63% 
IMG OID642640208 
Productmultidrug resistance membrane translocase 
Protein accessionYP_001914065 
Protein GI188577136 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.487953 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGTTGT GCACCGTGGG CCTGGCCATG GCCTCGTTCA TGCAGGTGCT GGACACCACC 
ATCGCCAACG TCTCGCTGCC CACCATCGCC GGCAACCTCG GCGCCAGTTC GCAGCAGGCC
ACCTGGGTGA TCACTTCGTT CGCGGTCAGC ACCGCGATCG CGTTGCCGTT GACCGGTTGG
TTGAGCCGGC GCTTCGGCGA AACCAAATTA TTCGTGTGGT CCACGCTGGC ATTCACCATT
GCCTCGCTGC TGTGCGGGCT TGCGCAGAGC ATGGGCATGC TGGTGGTGGC GCGTGCGTTG
CAGGGCGTTG TCGCCGGGCC GATGTATCCC ATCACCCAGA GTCTGCTGGT GTCGATCTAT
CCGCGCGAAA AACGCGGGCA GGCGCTGGCG TTGCTGGGGA TGATCACCGT GGTGGCGCCG
ATTGCCGGGC CAATTCTCGG TGGCTGGATC ACCGACGACT ACAGCTGGGA ATGGATCTTC
TTGATCAACG TGCCGCTGGG CATCATCGCC AGCAGTATCG TGGGTTCGCA GTTGCGGCAT
CGCCCCGAAC AGCTCGAAAA GCCGCGCATG GATTACATCG GCCTGATCCT GCTGGTGGCC
GGTGTGGGTG CGCTGCAGTT GGTGCTGGAC CTGGGCAATG ACGAGGACTG GTTCTCTTCC
GACAAGATCG TGGTGCTGGC CTGCGTCGCT GCGGTGGCGC TGGTGGTGTT CGTGATCTGG
GAGCTGACCG ACAAGGACCC CATCGTCGAT CTCAAGCTGT TCCGGCATCG CAACTTCCGC
ACCGGCACGT TGGCGATGGT GGTGGCGTAT GCCGCGTTCT TCAGCGTGAG CCTGCTGATC
CCGCAATGGC TGCAGCGCGA CATGGGTTAC ACCGCGATCT GGGCCGGCCT TGCGACTGCG
CCGATCGGCA TCCTGCCGGT GCTGATGACG CCGTTCGTGG GCAAATACGC GCTGCGCTTC
GACCTGCGCC TGCTGGCTAC CATCGCCTTT ATCTTCATGT CATTCACCAG CTTCTTCCGT
TCCAACTTCA ACCTGCAGGT GGACTTCAGC CATGTGGCGA CCATCCAGCT GGTGATGGGC
GTGGGCGTGG CGCTGTTCTT CATGCCGGTG CTGCAGATCC TGCTGTCGGA TCTGGATGGG
CGCGAAATCG CTGCAGGTTC TGGTCTGGCC ACCTTCCTGC GTACGTTGGG CGGAAGCTTC
GCCGCATCGT TGAGCACCTA CCTGTGGGCA CACCGTACCC AGGTGCATCA CGCGCACATC
ACCGAACACA TTTCGGTGTA CACGCCCGGC ATGCAGGAAC GACTGGCTGC GATGGGGCAG
GGCGACCTGA AGCGTGGCGC TGCATCGCTC AACAACATGA TCAACCACCA GGCGTCGCAG
ATGGGCTTCA ACGACATCTT CTATCTGCTT GGTTGGACCT TTCTGGCAAT CATCTTCTTC
CTGTGGCTGG CCAAGCGGCC GTTCGGCGCC GGTGCCGGGA GTGCAGCGGC GGCAGCGGGG
CACTGA
 
Protein sequence
MALCTVGLAM ASFMQVLDTT IANVSLPTIA GNLGASSQQA TWVITSFAVS TAIALPLTGW 
LSRRFGETKL FVWSTLAFTI ASLLCGLAQS MGMLVVARAL QGVVAGPMYP ITQSLLVSIY
PREKRGQALA LLGMITVVAP IAGPILGGWI TDDYSWEWIF LINVPLGIIA SSIVGSQLRH
RPEQLEKPRM DYIGLILLVA GVGALQLVLD LGNDEDWFSS DKIVVLACVA AVALVVFVIW
ELTDKDPIVD LKLFRHRNFR TGTLAMVVAY AAFFSVSLLI PQWLQRDMGY TAIWAGLATA
PIGILPVLMT PFVGKYALRF DLRLLATIAF IFMSFTSFFR SNFNLQVDFS HVATIQLVMG
VGVALFFMPV LQILLSDLDG REIAAGSGLA TFLRTLGGSF AASLSTYLWA HRTQVHHAHI
TEHISVYTPG MQERLAAMGQ GDLKRGAASL NNMINHQASQ MGFNDIFYLL GWTFLAIIFF
LWLAKRPFGA GAGSAAAAAG H