Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_01157 |
Symbol | |
ID | 6306453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 3012670 |
End bp | 3014175 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642640208 |
Product | multidrug resistance membrane translocase |
Protein accession | YP_001914065 |
Protein GI | 188577136 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.487953 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCGTTGT GCACCGTGGG CCTGGCCATG GCCTCGTTCA TGCAGGTGCT GGACACCACC ATCGCCAACG TCTCGCTGCC CACCATCGCC GGCAACCTCG GCGCCAGTTC GCAGCAGGCC ACCTGGGTGA TCACTTCGTT CGCGGTCAGC ACCGCGATCG CGTTGCCGTT GACCGGTTGG TTGAGCCGGC GCTTCGGCGA AACCAAATTA TTCGTGTGGT CCACGCTGGC ATTCACCATT GCCTCGCTGC TGTGCGGGCT TGCGCAGAGC ATGGGCATGC TGGTGGTGGC GCGTGCGTTG CAGGGCGTTG TCGCCGGGCC GATGTATCCC ATCACCCAGA GTCTGCTGGT GTCGATCTAT CCGCGCGAAA AACGCGGGCA GGCGCTGGCG TTGCTGGGGA TGATCACCGT GGTGGCGCCG ATTGCCGGGC CAATTCTCGG TGGCTGGATC ACCGACGACT ACAGCTGGGA ATGGATCTTC TTGATCAACG TGCCGCTGGG CATCATCGCC AGCAGTATCG TGGGTTCGCA GTTGCGGCAT CGCCCCGAAC AGCTCGAAAA GCCGCGCATG GATTACATCG GCCTGATCCT GCTGGTGGCC GGTGTGGGTG CGCTGCAGTT GGTGCTGGAC CTGGGCAATG ACGAGGACTG GTTCTCTTCC GACAAGATCG TGGTGCTGGC CTGCGTCGCT GCGGTGGCGC TGGTGGTGTT CGTGATCTGG GAGCTGACCG ACAAGGACCC CATCGTCGAT CTCAAGCTGT TCCGGCATCG CAACTTCCGC ACCGGCACGT TGGCGATGGT GGTGGCGTAT GCCGCGTTCT TCAGCGTGAG CCTGCTGATC CCGCAATGGC TGCAGCGCGA CATGGGTTAC ACCGCGATCT GGGCCGGCCT TGCGACTGCG CCGATCGGCA TCCTGCCGGT GCTGATGACG CCGTTCGTGG GCAAATACGC GCTGCGCTTC GACCTGCGCC TGCTGGCTAC CATCGCCTTT ATCTTCATGT CATTCACCAG CTTCTTCCGT TCCAACTTCA ACCTGCAGGT GGACTTCAGC CATGTGGCGA CCATCCAGCT GGTGATGGGC GTGGGCGTGG CGCTGTTCTT CATGCCGGTG CTGCAGATCC TGCTGTCGGA TCTGGATGGG CGCGAAATCG CTGCAGGTTC TGGTCTGGCC ACCTTCCTGC GTACGTTGGG CGGAAGCTTC GCCGCATCGT TGAGCACCTA CCTGTGGGCA CACCGTACCC AGGTGCATCA CGCGCACATC ACCGAACACA TTTCGGTGTA CACGCCCGGC ATGCAGGAAC GACTGGCTGC GATGGGGCAG GGCGACCTGA AGCGTGGCGC TGCATCGCTC AACAACATGA TCAACCACCA GGCGTCGCAG ATGGGCTTCA ACGACATCTT CTATCTGCTT GGTTGGACCT TTCTGGCAAT CATCTTCTTC CTGTGGCTGG CCAAGCGGCC GTTCGGCGCC GGTGCCGGGA GTGCAGCGGC GGCAGCGGGG CACTGA
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Protein sequence | MALCTVGLAM ASFMQVLDTT IANVSLPTIA GNLGASSQQA TWVITSFAVS TAIALPLTGW LSRRFGETKL FVWSTLAFTI ASLLCGLAQS MGMLVVARAL QGVVAGPMYP ITQSLLVSIY PREKRGQALA LLGMITVVAP IAGPILGGWI TDDYSWEWIF LINVPLGIIA SSIVGSQLRH RPEQLEKPRM DYIGLILLVA GVGALQLVLD LGNDEDWFSS DKIVVLACVA AVALVVFVIW ELTDKDPIVD LKLFRHRNFR TGTLAMVVAY AAFFSVSLLI PQWLQRDMGY TAIWAGLATA PIGILPVLMT PFVGKYALRF DLRLLATIAF IFMSFTSFFR SNFNLQVDFS HVATIQLVMG VGVALFFMPV LQILLSDLDG REIAAGSGLA TFLRTLGGSF AASLSTYLWA HRTQVHHAHI TEHISVYTPG MQERLAAMGQ GDLKRGAASL NNMINHQASQ MGFNDIFYLL GWTFLAIIFF LWLAKRPFGA GAGSAAAAAG H
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