| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_01141 |
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| Symbol | dapD |
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| ID | 6306471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 3033695 |
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| End bp | 3034891 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642640225 |
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| Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
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| Protein accession | YP_001914082 |
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| Protein GI | 188577153 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
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| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0122955 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCACCA GCAAGAAGAC CGCGCCCAAG CAGAGCGCGA CCACCAACAA GGCAACGTCC
AAGCCCACGC GCGCAACGCG TGGCAAGGCT GCCAAGGCGC CGGTTGCCGC CTCCAAGCCG
CTTGCTGGCG TCGGCAAAAA GAGCGCTGCT GCCGGTGCTA TCGGCAGCAA GGCCGCTGCA
CCGAGCGCTG CAGGCCACAC ACCTGCCGCA AAGAAGGCAG CCAGCAAGCA AGCGTCTTCT
ACTGCACCGC GCGTGGCCAA GCAGCCGACC AAGGTGGTTT CTGCACCGGC CGCAGAGAAA
GCTGCTGCGG CAAAGAAACT GCCGATTGCC GAGCAGGCCG TGCACAGCGC CGCAACGCAG
GTGGGCAGCG ATGAACTCAA ATTCGGTATC GAAAGCGCGT TCGAACGGCG CGCCACGCTG
ACCATGGACG AGATCGACGG CTCCACGCGC GCAATGGTCA CGCGCGTGAT CGACGGCCTG
GAAAGCGGCG AATTTCGCGT CGCCGAGCCG GACGGGCAGG GCGGCTGGGC CGTCAACGCG
TGGTTGAAAA AAGCCGTGCT GCTGTATTTC CGCGTCAACG AGATGGCGGT GATCGATGCA
CAGCCGGCGC CGTTCTGGGA CAAGGTGGAA TCGCGCTTTG CCGGCTTCCA TGAAGCGCAA
TTCCGCAAGG CCGGCGTGCG CGTGGTGCCG GGCGCGGTGG CGCGGCGCGG CAGTTACTTC
GGCAAGGACG TGGTGCTGAT GCCGAGCTTC ACCAACATCG GTGCGTATGT CGGCGAAGGC
ACCATGGTCG ACACCTGGGC CACGGTGGGT TCGTGCGCGC AGATCGGCAA GCATTGCCAT
CTGTCCGGCG GCGCCGGCAT CGGCGGCGTG CTCGAACCGC TGCAGGCCAG TCCCACCATC
ATCGAAGATC ACTGCTTCAT CGGCGCACGT TCGGAAGTGG TGGAGGGTGT GGTCATCGGC
CACCACAGCG TGATCGGCAT GGGCGTGTTC ATCGGCCAGA GCACGCGCAT CTACAACCGC
GCCACCGGCG AGATTTCCTA TGGATACGTG CCGCCGTACA GCGTGGTGGT GTCCGGCCAG
CTGCCCTCCA AAGACGGCTC GCACTCGCTG TATTGCGCGG TGATCGTCAA GCAGGTCGAT
GCCAGGACGC GCAGCAAGAC CAGCGTCAAC GAGTTGCTGC GCGGTCTGGC CGATTGA
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| Protein sequence | MATSKKTAPK QSATTNKATS KPTRATRGKA AKAPVAASKP LAGVGKKSAA AGAIGSKAAA
PSAAGHTPAA KKAASKQASS TAPRVAKQPT KVVSAPAAEK AAAAKKLPIA EQAVHSAATQ
VGSDELKFGI ESAFERRATL TMDEIDGSTR AMVTRVIDGL ESGEFRVAEP DGQGGWAVNA
WLKKAVLLYF RVNEMAVIDA QPAPFWDKVE SRFAGFHEAQ FRKAGVRVVP GAVARRGSYF
GKDVVLMPSF TNIGAYVGEG TMVDTWATVG SCAQIGKHCH LSGGAGIGGV LEPLQASPTI
IEDHCFIGAR SEVVEGVVIG HHSVIGMGVF IGQSTRIYNR ATGEISYGYV PPYSVVVSGQ
LPSKDGSHSL YCAVIVKQVD ARTRSKTSVN ELLRGLAD
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