Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_01135 |
Symbol | |
ID | 6306477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 3042278 |
End bp | 3043312 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642640231 |
Product | spore Coat Protein U domain family |
Protein accession | YP_001914088 |
Protein GI | 188577159 |
COG category | [S] Function unknown |
COG ID | [COG5430] Uncharacterized secreted protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0663503 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCATGT CCACGCTTTG GCGCCTGGCA CTTGCGCTGA CGATCGCGAT TGTGTGGCTC GCACCCAGCG AACGTGCGCA CGCGGACACC ACGTGTACCG TCACCCTTGG CACTCCGTTG GCATTTGGCA ACGTGGCGGT CAACGGCACC ACCGATGCAG TGGCAACGCT CAATGTGTCC TGCGCGACTG CCGCGCTCAG CGTGCTGGGC TATGCACAAG TCAGCCTTTG CCTGGACCTT GGCCCGGGCA GTGCCAGCAG CGGCATCTAT GCACCACGCC GCATGCTCAA CTCCACCAGC GACGGGCTGG ACTTCCAGAT ATACAGCGAG GCGACGCGCA CGCAGATCTG GGGCGCCACC GGGTCAGCGG CGCCCTCGCC ACGCACATTG ACACTGTCCT ATAACGTCCC GGTGATCATC GGCGGCTCAC AGACGGCCAC CATTACCGTG TATGGGCGAA TTCCGGCCAG CCAGATCCTG TCGGTCGGCA ACCACACCAG TACTTTTGGC GGCGCCGACA CCGTGCTGCG CTATTCCTAC AACGAAAGCA TCACTGGTGT GCCGCCGGCG CCGAGCAACT GCACAGCTGG CGGCAGCGGC TCCAAGACTG CCAGTAACGC GTTTCCGTTC ACCGCCTCGG CCAACGTGCC GGCACGCTGC AATACCTATG TCACCACGGA CCTGGATTTC GGCAGCATCG CCGGCACCAT CGACACCGCC ATCGATCGTA CGTCCACCAT CAGCCTGGCC TGCACCAACC GTACCGCCTG GAATATCGGG CTGGACAACG GCAGCAACGC CACCGGCAAC GTCCGGCGCA TGCGCCACGC CAGCAGCGCC AATTACATTA CCTACGAGCT CTACAGCAAC GCTGGCCGCA GTGCACGGTG GGGCACCGTC ACCGGGGTGG ACACGCTGTC CGGCACCGGT AACGGCACGA CGCAGACGGT CACGGTCTAC GGCCGCGCGC CGGCTCCACA ACTGCCCATT GCTGGCGCCT ACACCGACAC GGTGACCGTC TCGATCACTT ACTGA
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Protein sequence | MSMSTLWRLA LALTIAIVWL APSERAHADT TCTVTLGTPL AFGNVAVNGT TDAVATLNVS CATAALSVLG YAQVSLCLDL GPGSASSGIY APRRMLNSTS DGLDFQIYSE ATRTQIWGAT GSAAPSPRTL TLSYNVPVII GGSQTATITV YGRIPASQIL SVGNHTSTFG GADTVLRYSY NESITGVPPA PSNCTAGGSG SKTASNAFPF TASANVPARC NTYVTTDLDF GSIAGTIDTA IDRTSTISLA CTNRTAWNIG LDNGSNATGN VRRMRHASSA NYITYELYSN AGRSARWGTV TGVDTLSGTG NGTTQTVTVY GRAPAPQLPI AGAYTDTVTV SITY
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