Gene PXO_01125 details

Gene Information

• Locus tag: PXO_01125
• Symbol: dxr
• ID: 6306487
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: +
• Start bp: 3050290
• End bp: 3051480
• Gene Length: 1191 bp
• Protein Length: 396 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 642640241
• Product: 1-deoxy-D-xylulose 5-phosphate reductoisomerase
• Protein accession: YP_001914098
• Protein GI: 188577169
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase
• TIGRFAM ID: [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 0.203199
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTGGTT CTTCTCTCCG TCAGGTCGCC GTCTTCGGCG CCACCGGCTC GATCGGCGCA 
TCGGCGCTGG ACGTGATCGC GCGCCACCCC GAGCGGCTGC GCGCCAGCGT GCTGTCGGCC 
GGCAGCAAGG TCGAGGACCT GCTGGCGCTA TGCGCCGCGC ACCGGCCTGC GCATGCGGTG 
ATCGCCGATG CAGCGCTGTA CCCGGCGCTA CGCGATGGCC TGCGCGCGCT CGGGCTGGCG 
ACCCAGGCGC ATGCCGGCGC CGAGGCGCTG GACGCACTGG CCGGCAGCGA CGCGTGCGAC 
ACCGTGGTGG CGGCGATCGT TGGTGCGGCG GGGCTGCCGT CTACGCTGGC GGCGGCGCGC 
GCTGGAAAGC GTCTGTTGCT GGCCAACAAG GAATCGCTGG TGCTGGCCGG CGAGTTGCTG 
ACCCGCACCG CAACCGCCGC CGGCGCTGAA ATCATTCCGA TCGACAGCGA ACACAGCGCC 
ATCTTCCAGT GCCTGCGCTC CTGCGACGCT GGCCGCGGCG TGCGCCGGGT CATCCTGACT 
GCCTCCGGTG GCCCGTTCCG TGGCCGGGAC CGCGCAGCGC TGGCGGCAGT CACGCCTGCG 
CAGGCGGTGG CGCATCCTAA GTGGTCGATG GGGCCGAAGA TCTCGGTGGA TTCGGCCACC 
CTGATGAACA AGGGCCTGGA AGTGATCGAG GCGCATCACC TGTTCGGCCT GCCGGGCGAG 
CAGATCGATG TGTTGGTGCA CCCGCAAAGC CTGGTGCATT CGCTGGTGGA ATTCGTCGAC 
GGCTCCACCC TGGCCCAGCT TGGCCTGCCG GACATGCGCA CCACTCTGGC GGTGGGCCTG 
GCCTGGCCGG AGCGGGTCGA ATCCGGGGTT GGCGGGCTGG ACCTGCTCAG CCAGGGCCGG 
CTGGATTTCG AGGCCCCGGA CACCGCCGCA TTCCCGTGCC TGCGCCTGGC CTGGGACGCA 
TTACGGGCCG GTGGCACCGC ACCGGCGGTC CTGAACGCGG CCAACGAAGT CGCTGTTTCA 
GCGTTTCTTC AGGGCCAGGT GGGTTTCCTA GCGATCCCTG CGTTGGTCGA ACACGCACTG 
ACAACGCTCC CGCGGCACAA TGCCGACACC CTCGACACCC TGCTTTTTGC CGATGCGCAA 
GCCCGGCAAG TCACTGAACG CGCCCTCGCC CACCACGCCC TTCATGCCTG A 

 

Protein sequence

MAGSSLRQVA VFGATGSIGA SALDVIARHP ERLRASVLSA GSKVEDLLAL CAAHRPAHAV 
IADAALYPAL RDGLRALGLA TQAHAGAEAL DALAGSDACD TVVAAIVGAA GLPSTLAAAR 
AGKRLLLANK ESLVLAGELL TRTATAAGAE IIPIDSEHSA IFQCLRSCDA GRGVRRVILT 
ASGGPFRGRD RAALAAVTPA QAVAHPKWSM GPKISVDSAT LMNKGLEVIE AHHLFGLPGE 
QIDVLVHPQS LVHSLVEFVD GSTLAQLGLP DMRTTLAVGL AWPERVESGV GGLDLLSQGR 
LDFEAPDTAA FPCLRLAWDA LRAGGTAPAV LNAANEVAVS AFLQGQVGFL AIPALVEHAL 
TTLPRHNADT LDTLLFADAQ ARQVTERALA HHALHA