| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_01116 |
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| Symbol | lpxB |
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| ID | 6306494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 3058982 |
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| End bp | 3060136 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642640248 |
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| Product | lipid-A-disaccharide synthase |
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| Protein accession | YP_001914105 |
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| Protein GI | 188577176 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0763] Lipid A disaccharide synthetase |
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| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00168511 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATTGCCG GCGAGGCCTC TGGCGACATC CTCGGCGCGG GGTTGATTGC GCAATTGCGG
CTGCGCTATC CGAATGCCGA ATTCGTCGGT ATCGGTGGCG ATGCGATGCG TGGGGCCGGT
TGCCAGACCT GGTTCGATGC CAGCGAATTG GCGGTGATGG GTCTGACCGA AGTGCTGCGG
CATTTGCCGC GCCTGCTCAA GCTGCGCAGC GCATTCCGCG AGCGCGTGCT GGCGTGGAAG
CCGGACGTGT TCATCGGCAT CGACGCACCC GATTTCAATC TACCGGTGGA GCGCTGGCTC
AAGCAGCGCG GGATCAAGAC CGTGCACTAC GTCAGCCCCT CGGTGTGGGC GTGGCGCGAG
AAGCGTGCCG AAAAGATCGC CGTCAGCGCC GATCTGGTGT TGTGCCTGTT CCCGATGGAG
CCGCCGATTT ACGCCAAACA CGGCGTGGAC GCGCGCTTCG TCGGCCATCC GATGGCCGAC
GATATCGCTT ACCAGGCCGA CCGCGATGCT GCGCGCGCCA CGCTGGGGTT GTCCGCCTCC
AGTACCGTGC TGGCAGTGCT GCCCGGCAGC CGGCATGGCG AAATCAGCCG GCTCGGCGAC
ACGTTTCTCC AGGCTGCCTG GCTGGTGTGC GAACACATCC CTAACCTGCA CGTACTGGTA
CCGGCAGCCA ACGCGGGCTG CAAGCAACTG CTGGCCGAGC AGCTCTCGCG CTCGTCGCTG
CCAGTGATGC GATCGCACCT GATCAACGGC CAGGCGCGCA CCGCGATGTT GGCCGCCGAC
GTCGTGCTGT TGGCCTCCGG CACCGCCACG CTGGAAGCGA TGCTGGTCAA GCGCCCGATG
GTGGTCGGCT ACAAGGTCGC CCCGCTCACC TACCGCATCG TCAAGCTGCT GGGGCTGATC
AAGGTCAACC GCTACGCCCT GCCCAATATC CTGGCCAATG ACGATCTCGC GCCCGAGCTG
ATGCAGGACG ACTGCATGCC CGAGCGACTG TGCGTGGCGC TGCTGGACTG GTTGAAGCAT
CCCGCCAAGG TCGCTGCGCT GCAGCCGCGT TATCTGGCAC TGCATGCAGC GTTGCGCCGC
GATGCGTCGG CGCGGGCAGC GGAGGCGGTG GCTGGGCTGC TTCAGGGCCG GGATTGGTCA
GGAGCAAACA TATGA
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| Protein sequence | MIAGEASGDI LGAGLIAQLR LRYPNAEFVG IGGDAMRGAG CQTWFDASEL AVMGLTEVLR
HLPRLLKLRS AFRERVLAWK PDVFIGIDAP DFNLPVERWL KQRGIKTVHY VSPSVWAWRE
KRAEKIAVSA DLVLCLFPME PPIYAKHGVD ARFVGHPMAD DIAYQADRDA ARATLGLSAS
STVLAVLPGS RHGEISRLGD TFLQAAWLVC EHIPNLHVLV PAANAGCKQL LAEQLSRSSL
PVMRSHLING QARTAMLAAD VVLLASGTAT LEAMLVKRPM VVGYKVAPLT YRIVKLLGLI
KVNRYALPNI LANDDLAPEL MQDDCMPERL CVALLDWLKH PAKVAALQPR YLALHAALRR
DASARAAEAV AGLLQGRDWS GANI
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