| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_01112 |
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| Symbol | trmH |
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| ID | 6306368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 2933234 |
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| End bp | 2934001 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642640124 |
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| Product | RNA methyltransferase, TrmH family, group 3 |
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| Protein accession | YP_001913982 |
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| Protein GI | 188577053 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0566] rRNA methylases |
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| TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAGC AGAATCAGTG GATCGTCGGC GTCAATGCTG TCGCCTCGTC CGTCGAGAAC
GACGCCGATA ACGTGCGCGA GGTATTGATC GAGGCCGGCA GCAAGAACCC GCGCCTCACC
GAGATCGAAG AGCAGGCGCG CCGCAAGGGC ATCGACGTGC GCCGGGTCAA CACCCAGGCG
CTGGATGGCG TAGCCGGGCA GGTGCGTCAT CAGGGCGTGG CCGCCCGCTA TGCCGTGGCA
CGGCTATGGG CAGAGAATGA GCTGGAAGGC CTGGTCGAGG CAGCCGAAGG GCGCGCGCTG
GTGCTGATCC TCGACGGCGT ACAGGACCCG CACAACCTCG GCGCCTGCCT GCGTAGCGCG
GCAGCCGCCG GCGTCACCGC GGTGGTGATT CCCAAGGACA AGTCGGCCTC GGTGAATGCC
ACCGTGCGCA AGACCTCCGC TGGTGCGGCC GACCGCATTC CGGTGGTGGC GGTGACCAAT
CTGGCGCGCT GCCTGCGCGA TCTGCAGAAG CAGGGCGTGT GGCTGTATGG CCTGGCCGGC
GAAGCAGAGG CATCGTTGTA CAGCGTGGAT CTGCGCGGCA ATGTCGGATT GGTGCTCGGT
GGCGAGTCCG ATGGCCTGCG CCGTCTCACG CGCGAGCACT GCGACGGTCT GGTCAAGATT
CCGATGCCGG GTGAGATCGA GAGCCTCAAC GTATCGGTTG CGACCGGCGT GACCTTGTTC
GAAGTCGTAC GCCAGCGCTT GGAGCAAGTT AGCCAACAGG AGGTTTGA
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| Protein sequence | MSKQNQWIVG VNAVASSVEN DADNVREVLI EAGSKNPRLT EIEEQARRKG IDVRRVNTQA
LDGVAGQVRH QGVAARYAVA RLWAENELEG LVEAAEGRAL VLILDGVQDP HNLGACLRSA
AAAGVTAVVI PKDKSASVNA TVRKTSAGAA DRIPVVAVTN LARCLRDLQK QGVWLYGLAG
EAEASLYSVD LRGNVGLVLG GESDGLRRLT REHCDGLVKI PMPGEIESLN VSVATGVTLF
EVVRQRLEQV SQQEV
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