Gene PXO_01108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_01108 
Symbol 
ID6306163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp2713855 
End bp2714664 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content63% 
IMG OID642639925 
ProductISXo8 transposase 
Protein accessionYP_001913784 
Protein GI188576855 
COG category[L] Replication, recombination and repair 
COG ID[COG5659] FOG: Transposase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.000155134 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTGCCACT ATTGGAAGAC CTTCAGGCCG CGTGGGAGAG CTGTGTTGAA TAGGACACTG 
GAAGTGCGTT TTGAACAGTA CGGGGAAGTA GTTGCTGCCG CCCTGTCCCA TGCGGATCGC
AAACAGCCCG CACACTGGTA CCTGAAGGGG TTGCTACTGC CTGGAGGGCG CAAGAGCGTG
GAGCCCATGG CCGCGCGGGT GCACCCGCAG AACGTGGGCT CAGCCCATCA ATCGATGCAC
CATCTGGTGG CCGATGCCGA CTGGAGCGAT CAAGCGCTGC TGGCGGCGGT GGCGGCACAG
GTGCTGCCGC CCCTGAGCAG GAAGAGCGCA GCGTGTCACT GGATCGTGGA CGACACGGGA
TTTTCAAAGA AGGGTGTGCA TTCGGTCGGT GTTGCACGCC AGTACTGCGG CCGCCTTGGC
AAGACGGACA ATTGCCAGGT TGCCGTGAGT TTGTCGATCG CCAACGAACA CGGCAGCCTG
CCAGTGGGCT ATCGGCTGTA TCTTCCCGAG CAGTGGGCTC AGGACACTGT GCGGCGCAAG
AAGGCAGGCG TTCCGGATCA GGTCGTGTTT CAGACCAAGA CAGCGCTGGC CATGGATCAG
ATCGACAGCC CGCTGGCGAC AGGGATTGCG GCAGGCGTCG TGCTAGCCGA TGCGGCCTAC
GGCACCGAGA CCCACTGGCG AGACCAGCTC AGCGAACGCG GCCTGCTGTA CATGGTCGGC
GTCCGCAGCA ACACGAAGGT CTGGTGGGGA TCGCACCAAC CTGCGCCCAT GCCGCCAGCC
AGCCCTAAGA ACCTGTTCAC GATCTCCTGA
 
Protein sequence
MCHYWKTFRP RGRAVLNRTL EVRFEQYGEV VAAALSHADR KQPAHWYLKG LLLPGGRKSV 
EPMAARVHPQ NVGSAHQSMH HLVADADWSD QALLAAVAAQ VLPPLSRKSA ACHWIVDDTG
FSKKGVHSVG VARQYCGRLG KTDNCQVAVS LSIANEHGSL PVGYRLYLPE QWAQDTVRRK
KAGVPDQVVF QTKTALAMDQ IDSPLATGIA AGVVLADAAY GTETHWRDQL SERGLLYMVG
VRSNTKVWWG SHQPAPMPPA SPKNLFTIS