Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_01070 |
Symbol | |
ID | 6306150 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 2702696 |
End bp | 2703559 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642639913 |
Product | ISXo8 transposase |
Protein accession | YP_001913772 |
Protein GI | 188576843 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG5659] FOG: Transposase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0916111 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCGAAA ACTGCCAGAA ACTTAGTTTC ACTGTGTTAC AAATAATCGT ACCTTTGTGC CACTATTGGA AGACCTTCAG GCCGCGCGGG AGAGCTGTGT TGAATAGGAC ACTGGAAGTG CGTTTTGAAC AGTACGGGGA AGTAGTTGCT GCGGCCCTGT CCCATGCGGA TCGCAAACAG CCCGCACACT GGTACCTGAA GGGGTTGCTA CTGCCTGGAG GGCGCAAGAG CGTGGAGCCC ATGGCCGCGC GGGTGCACCC GCAGAACGTG CGCTCAGCCC ATCAATCGAT GCACCATCTG GTGGCCGATG CCGACTGGAG CGATCAAGCG CTGCTGGCGG CGGTGGCGGC ACAGGTGCTG CCGACCCTGA GCAGGAAGAG CGCAGCGTGT CACTGGATCG TGGACGACAC GGGATTTTCA AAGAAGGGGG TGCATTCGGT CGGTGTTGCA CGCCAGTACT GCGGCCGCCT TGGCAAGACG GACAATTGCC AGGTTGCCGT GAGTTTGTCG ATCGCCAACG AACACGGCAG CCTGCCAGTG GGCTATCGGC TGTATCTTCC CGAGCAGTGG GCTCAGGACA CTGTGCGGCG CAAGAAGGCA GGCGTTCCGG ATCAGGTCGT GTTTCAGACC AAGACAGCGC TGGCTATGGA TCAGATCGAC AGCGCGCTGG CGACAGGGAT TGCGGCAGGC GTCGTGCTAG CCGATGCGGC CTACGGCACC GAGACCCACT GGCGAGACCA GCTCAGCGAA CGCGGCCTGC TGTACATGGT TGGCGTCCGC AGCAACACGA AGGTCTTGTG GGGATCGCAC CAACCTGCGC CCATGCCGCC AGCCAGCCCT AAGAACCTGT TCGCGATCTC CTGA
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Protein sequence | MGENCQKLSF TVLQIIVPLC HYWKTFRPRG RAVLNRTLEV RFEQYGEVVA AALSHADRKQ PAHWYLKGLL LPGGRKSVEP MAARVHPQNV RSAHQSMHHL VADADWSDQA LLAAVAAQVL PTLSRKSAAC HWIVDDTGFS KKGVHSVGVA RQYCGRLGKT DNCQVAVSLS IANEHGSLPV GYRLYLPEQW AQDTVRRKKA GVPDQVVFQT KTALAMDQID SALATGIAAG VVLADAAYGT ETHWRDQLSE RGLLYMVGVR SNTKVLWGSH QPAPMPPASP KNLFAIS
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