Gene PXO_01051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_01051 
SymboltetR 
ID6306024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp2550893 
End bp2551525 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content65% 
IMG OID642639787 
Producttranscriptional regulator TetR family 
Protein accessionYP_001913647 
Protein GI188576718 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.250197 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCAAGT CCGCCCACTT CTCCACGAAG GACCGCATTC TCGGTGCGGC CGAGGAGCTG 
TTCGCCCAGC ACGGGTTCGC CGGCACGTCG CTGCGCCAGC TGACCACTCA GGCCGACGTC
AATATCGCTG CGGTCAATTA CCACTTCGGC TCCAAGGAAA ACCTGGTCAA CGAGGTGTTC
CGCCGGCGCA TGGACGAGAT GACCACGGCG CGGTTGCAGC AGCTGGAAGC GGCAAAGAAG
TCGCAACCCG GCGAGCTCAC CGCGGTACTG GCGGCGTTTG TCGAGCCGGC GCTGGCAATG
GCGCAGGACC GCCAGAACGG CGGCGCCTTC GTTCGCGTGA TCGCACGCGC CTACGCGGAA
AAAAACGACA ACTTGCGCAA GTTCCTGTCC GATCACTACG GCCATGTCCT GCGCGAATTC
GGCAAGGCCA TCACCGGCTG CGTGCCGGGC CTGAGCAAGG AAGAGCTGTA CTGGCGACTG
GACTTCCTCG CCGGTGCGCT GACCTATGCC ATGGCCGATT TCGGCCTCAT CAAGCGGCCT
GCGGGCGTCA GCGAGGCCGA TCACCGCGCG CGTGCCGCGC GCGAACTCAT TCGTTTCGCG
GAACCCGGTT TCCGTGCTCA CTCCACACCG TAA
 
Protein sequence
MPKSAHFSTK DRILGAAEEL FAQHGFAGTS LRQLTTQADV NIAAVNYHFG SKENLVNEVF 
RRRMDEMTTA RLQQLEAAKK SQPGELTAVL AAFVEPALAM AQDRQNGGAF VRVIARAYAE
KNDNLRKFLS DHYGHVLREF GKAITGCVPG LSKEELYWRL DFLAGALTYA MADFGLIKRP
AGVSEADHRA RAARELIRFA EPGFRAHSTP