| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_01030 |
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| Symbol | clpA |
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| ID | 6306043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 2574362 |
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| End bp | 2576572 |
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| Gene Length | 2211 bp |
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| Protein Length | 736 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642639806 |
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| Product | ATP-dependent Clp protease ATP-binding subunit ClpA |
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| Protein accession | YP_001913666 |
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| Protein GI | 188576737 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0433703 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGTCG AGCACCTGCT GCTCTCGCTG CTGGACAACC CCTCCGCCCA GGCCGTGCTC
AAGGCCTGCG GTGCTGATCA GGTGCGTCTG CACACCGATC TGGAACAGGC GATCGAAGCG
TCTGTTTCGC GTTTGGCCGA AGACGACGGG CGCGACACGC AGCCCACGCT GGGCTTCCAG
CGCGTGTTGC AGCGCGCCGT CTACCACGTG CAGTCTTCGG GCAAGAAGGA GGTCACCGGC
GCCAATGTGC TGGTGGCGAT CTTCGGTGAA AAGGACTCCC ATGCGGTGTA TTTCCTGAAT
CAGCAGGACA TCACCCGATT GGATATCGTC AACTACATCT CGCACGGCAT CGCCAAGCTG
GGTGAGGACG GCGAGCAGCC GTCCGCGCCG GATGGCGAGT CCAAGGGCGA AGGCGGGGAG
GGCGAAGTCA AGGGCGACGC GCTGGCCGAG TTCGCCGCCA ACCTCAACGA GCAGGCGCGT
AACGGCAGGA TCGACCCGCT GGTCGGGCGC GCCGATGAAA TCGAGCGCAC CATCCAGGTC
CTGTGCCGCC GGCGCAAGAA TAACCCGCTA TACGTGGGTG AGGCGGGCGT AGGCAAGACT
GCGATCGCCG AGGGCCTGGC CAGGCGCATT GTCGACAACG ATGTGCCGGA AGTGCTGGCC
GATGCAGTGA TCTTCTCGCT GGATCTGGGC GCACTGGTGG CGGGCACCAA GTACCGCGGC
GATTTCGAAA AGCGCCTCAA GAGCGTGTTG GCCGCGCTGA AGAAGGTGCC CAACGCGGTG
CTGTTTATCG ACGAGATCCA CACCATCATT GGTGCCGGCT CGGCGTCTGG CGGCACCATG
GACGCTTCCA ACCTGATCAA GCCGGCCCTG TCGTCGGGCG AGCTGCGCTG CATCGGCTCC
ACCACGTTCC AGGAATATCG CGGCATTTTT GAGAAGGACC GGGCGCTGGC ACGCCGCTTC
CAGAAGATCG ACATCGTCGA GCCGACCGTG GGCGAAACCT TCGAGATCCT GCAGGGCCTC
AAGCCCAAAT ACGAAGCGCA CCACGGCGTG ACCTACGCCG ACGATGCATT GCAGGCAGCA
GTGGACCTGT CGGTGAAGCA CATCGGCGAC CGCTTGCTGC CGGACAAGGC GATCGATGTG
ATCGACGAGG CCGGTGCGCG CCAGCGGTTG CTGCCGGAAG GCATGCGCAA GGAATTGATC
GACATCGAAG AGATCGAGAC CATCGTGGCC AAGATGGCGC GGATTCCGGC CAAGCAGGTC
AGCGCAACCG ACAAGGACGT GCTGCAGCAT CTGGAGCGTA ACCTGAAGAT GGTGATCTTC
GGGCAGAACC TGGCGATCGA AACGCTGGCC GGGTCGATCA AGCTGGCCCG TTCCGGCTTG
GCGAATCCGG AAAAGCCGAT CGGCAATTTC CTGTTTGCCG GCCCCACCGG TGTCGGCAAG
ACCGAGGTCA CCAAGCAGCT TGCGCTGCAG CTGGGCATCG AGCTGGTGCG CTTCGATATG
TCCGAGTACA TGGAAGCGCA TTCGATCAGC CGCCTGATCG GTGCGCCTCC GGGCTATGTC
GGTTTCGATC AGGGGGGCTT GCTGACCGAG AAGATCGTCA AGACGCCGCA CTGCGTGCTG
CTGCTGGACG AAGTGGAGAA GGCGCATCCG GACATCTTCA ACATCCTGTT GCAGGTCATG
GACCGCGGCA TCCTCACCGA TACCAACGGG CGCGAAGCCA ACTTCAAGAA CGTGATCCTG
GTAATGACGA CCAATGCCGG TGCCACCCAG GCGTCGCGTC GGTCGATCGG TTTCACCAAG
CAGGATCATT CCACCGATGC GATGGAATCG ATTCGTCGCG GCTTCACGCC TGAGTTCCGC
AACCGCCTGG ATGCGATCGT GCAGTTCCAG CCACTCGGGT TCGACCACAT CCTGCGAGTG
GTGGACAAGT TCATCATCGA GCTGGAAATG CTGTTGCAGG AAAAGCACGT GTCGTTGTCG
GCCACGCCGA CTGCGCGCGA CTGGCTGGCC CAGCACGGCT TCGATCCGCT GATGGGCGCG
CGCCCGATGT CGCGGGTGAT CCAGGAAAAG ATCAAGCGTC CGCTGGCCGA CGAATTGCTG
TTCGGCAAGT TGGTAGATGG TGGCCGGGTC AACATCGACG TCAGGGATGG TGAGTTGGTG
GTCGAGGCGC ATCCGGAACC GGAGCGCTTG TTGCCCGCGA CGGTGGATTG A
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| Protein sequence | MTVEHLLLSL LDNPSAQAVL KACGADQVRL HTDLEQAIEA SVSRLAEDDG RDTQPTLGFQ
RVLQRAVYHV QSSGKKEVTG ANVLVAIFGE KDSHAVYFLN QQDITRLDIV NYISHGIAKL
GEDGEQPSAP DGESKGEGGE GEVKGDALAE FAANLNEQAR NGRIDPLVGR ADEIERTIQV
LCRRRKNNPL YVGEAGVGKT AIAEGLARRI VDNDVPEVLA DAVIFSLDLG ALVAGTKYRG
DFEKRLKSVL AALKKVPNAV LFIDEIHTII GAGSASGGTM DASNLIKPAL SSGELRCIGS
TTFQEYRGIF EKDRALARRF QKIDIVEPTV GETFEILQGL KPKYEAHHGV TYADDALQAA
VDLSVKHIGD RLLPDKAIDV IDEAGARQRL LPEGMRKELI DIEEIETIVA KMARIPAKQV
SATDKDVLQH LERNLKMVIF GQNLAIETLA GSIKLARSGL ANPEKPIGNF LFAGPTGVGK
TEVTKQLALQ LGIELVRFDM SEYMEAHSIS RLIGAPPGYV GFDQGGLLTE KIVKTPHCVL
LLDEVEKAHP DIFNILLQVM DRGILTDTNG REANFKNVIL VMTTNAGATQ ASRRSIGFTK
QDHSTDAMES IRRGFTPEFR NRLDAIVQFQ PLGFDHILRV VDKFIIELEM LLQEKHVSLS
ATPTARDWLA QHGFDPLMGA RPMSRVIQEK IKRPLADELL FGKLVDGGRV NIDVRDGELV
VEAHPEPERL LPATVD
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