Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_01026 |
Symbol | mnmA |
ID | 6306046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 2577814 |
End bp | 2578950 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642639809 |
Product | tRNA-specific 2-thiouridylase MnmA |
Protein accession | YP_001913669 |
Protein GI | 188576740 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0684754 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTACGC CGCACATTGT GGTAGGCGTG TCTGGCGGCG TGGATTCGTC GGTGGCCGCA TGGAAGCTGG CGCAGCAGGG CGAGCCGATC GCCGGGCTGT TCATGCAGAA TTGGGCCGAC GACGGCAGCG GCGATTGCCG CGCCGAAGAC GATCGCCGCG ACGCGGTCGC GGTCTGCGGC GTGCTGGGTA TGCCGTTTCA TTTCCGCGAC TTCTCCGGCG AATACTGGAG CGGCGTGTTC GAGCATTTCC TGGCCGAATA CGCGGCCGGG CGCACGCCTA ACCCGGACGT GTTGTGCAAC CGCGAAGTCA AGTTCAAGCA TTTTCTCGAC GCAGCGCAGG CGCTCGGCGC AGAGCGCATC GCCACCGGCC ATTACGCGCA GGTGGCGCAT CGCGGCGGGC GCTGGCGCCT GTTGCGTGGC GCCGACCGCG ACAAGGACCA GAGCTATTTT TTGCATCAGC TGGGACAGAG CCAGCTGGCG GCGACGCTCT TCCCGATCGG CGATCTGGAA AAAAGCACGC TGCGTCGAAT CGCCCGGGAC GCCGGCTTGC CGACCCACGC CAAGAAGGAT TCCACCGGCA TCTGCTTCAT CGGCGAGCGC GATTTCCGCG AATTTCTGGG CCGCTACCTG CCCGCGCGCA CCGGCGAGAT CCGCGACCCG CAGGGGCAGC GCATCGCCGA GCATCCTGGG GTGTTCTACT TCACCCTGGG TCAGCGCGAG GGGCTGAACA TCGGCGGCGT GCGCGGGCGT GCTGCCGCGC CGTGGTACGT GGTTGGCAAG GATGTGGCGA GCAATGTGCT GTACGTGGAC CAGGACCGCG ACAGCCCATT GCTGCAATCG CGCTGGCTGC AGTCCGAACA AGCCCACTGG GTGACCGGTG CGCCGCCGGC ACGCCGCTTC AGCTGCACTG CGCAGACCCG CTACCGCCAG CCCGACGAGC CCTGCACGGT CGACGTGCAG GACGATGGCA GCGTGCAGGT GCACTTCGAA CGGCCGCAAC GGGCGGTGAC GCCGGGGCAG TCGCTGGTGC TGTACGACGG CAAGGAATGC CTGGGCGGTG CCGTCATCGC CGCCACCGAC GCACCGCTGG AACGCCAGTT GGCGGGATCT TCTTTTTCCT CCGAGGTAGT GGCTTGA
|
Protein sequence | MSTPHIVVGV SGGVDSSVAA WKLAQQGEPI AGLFMQNWAD DGSGDCRAED DRRDAVAVCG VLGMPFHFRD FSGEYWSGVF EHFLAEYAAG RTPNPDVLCN REVKFKHFLD AAQALGAERI ATGHYAQVAH RGGRWRLLRG ADRDKDQSYF LHQLGQSQLA ATLFPIGDLE KSTLRRIARD AGLPTHAKKD STGICFIGER DFREFLGRYL PARTGEIRDP QGQRIAEHPG VFYFTLGQRE GLNIGGVRGR AAAPWYVVGK DVASNVLYVD QDRDSPLLQS RWLQSEQAHW VTGAPPARRF SCTAQTRYRQ PDEPCTVDVQ DDGSVQVHFE RPQRAVTPGQ SLVLYDGKEC LGGAVIAATD APLERQLAGS SFSSEVVA
|
| |