Gene PXO_01011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_01011 
SymbolflgD 
ID6306061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand+ 
Start bp2594823 
End bp2595488 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content60% 
IMG OID642639824 
Productflagellar basal body rod modification protein 
Protein accessionYP_001913684 
Protein GI188576755 
COG category[N] Cell motility 
COG ID[COG1843] Flagellar hook capping protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.695232 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACGA TTGCCAGCGA TCTCTACAAA ACCCTTGGCC TGAGTACCAG CAGCAAAACA 
CCCAAAAAAG AAGAATCGCT CGGCCAGGCC GACTTCCTCA AGTTGATGAC CGAGCAGCTG 
CAGCACCAAG ACCCGCTCAA ACCAATGGAA AACAGCGCGT TTCTTGGCCA GCTGGCGCAG 
TTCTCCACCG TGCAGGGCAT TGGCGACCTC AATACCAAGG TCAGCAATTT CTCCACGTCG 
ATGAGCAGCG ATCAGGTGCT CAAGGGTGCG GCGCTGGTGG GTCACAACGT GCTGGTGCCC 
TCGGCGCAGG TGGCGATCGA TGCCACTGGC TCGGCCAAAG GCGTGGTCAC CGCGACCTCG 
GCCGGCACCG TCAATTTTGA AATCACCGAT GCCAACGGCG CCTTCGTCAA ACAGATCAGC 
TTACCGTCCA GCGCCGCCGG TGAGGTGTCG TTTGCCTGGG ATGGTACCGA TGCCAACGGC 
AACCGTATGG CGGCCGGCAA ATACGGCGTG ACCGCCACCC AGACCGACAC CGCTGGCTCC 
AAAAGCAAGT TGTCTACCTA TGTCGATGCA CCGGTGGACA GCGTCACGAT CGGCTCGGAC 
GGCTTGTATC TCAACCTGAC CGGGCTAGGC ACTTCCCCGC TCGCCAACGT GCTCCGCATC 
AGCTGA
 
Protein sequence
MSTIASDLYK TLGLSTSSKT PKKEESLGQA DFLKLMTEQL QHQDPLKPME NSAFLGQLAQ 
FSTVQGIGDL NTKVSNFSTS MSSDQVLKGA ALVGHNVLVP SAQVAIDATG SAKGVVTATS 
AGTVNFEITD ANGAFVKQIS LPSSAAGEVS FAWDGTDANG NRMAAGKYGV TATQTDTAGS 
KSKLSTYVDA PVDSVTIGSD GLYLNLTGLG TSPLANVLRI S