Gene PXO_01003 details

Gene Information

• Locus tag: PXO_01003
• Symbol: flgK
• ID: 6306068
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: +
• Start bp: 2602062
• End bp: 2603936
• Gene Length: 1875 bp
• Protein Length: 624 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 642639831
• Product: flagellar hook-associated protein FlgK
• Protein accession: YP_001913691
• Protein GI: 188576762
• COG category: [N] Cell motility
• COG ID: [COG1256] Flagellar hook-associated protein
• TIGRFAM ID: [TIGR02492] flagellar hook-associated protein FlgK

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.163579
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCATCA TGTCCACCGG GACCAGCGCA CTCATCGCCT TCCAACGGGC GTTGTCGACC 
GTTAGCCATA ACGTCGCCAA CATCAATACC GAAGGCTACA GCCGCCAACG TGTGGAATTC 
GCAACGCGCA CGCCCACCGA CATGGGCTAC GCGTTCGTGG GCAATGGTGC CAAGATCACC 
GATGTGGGCC GGGTGGCCGA CCAGCTGGCC ATCTCGCGCC TGCTCGACAG CGGCGGCGAA 
CTCTCGCGCC TGCAGCAGCT GTCCTCGCTG TCCAACCGCG TCGATGCGCT CTACTCCAAC 
ACCGCCACCA ACGTGGCCGG GCTGTGGTCG AACTTCTTCG ATTCCACCAG CGCGGTGTCG 
TCCAACGCCT CGTCCACTGC CGAGCGCCAG AGCATGCTCG ACAGCGGCAA TTCGCTGGCG 
ACGCGCTTCA AGCAGCTCAA CGGGCAGATG GACGGCCTGA GCAATGAAGT CAACAGCGGG 
CTGACCTCGT CGGTAGATGA GGTCAATCGC TTGACGCAGC AGATCGCCAA GCTCAACGGC 
ACCATCGGCA GCAGTGCGCA GAACGCAGCG CCGGACATGC TCGATCAGCG CGACGCGCTG 
GTGAGCAAGC TGGTCGGCTA CACCGGCGGT ACCGCGGTGA TGCAGGACGG CGGCTTCATC 
AATGTTTTCA CCGCCGGCGG ACAAGCGCTG GTGGTCGCTA CCACCTCTTC CAAGCTCACC 
ACCGTCGCCG ACCCGTATCA GCCGACCAAG CTGCAGGTGG CGATGCAGAC CCAGGGCCAG 
AACGTCAGCC TCAGCGCCAA CTCGCTGGGC GGGCAGATCG GCGGCCTGCT GGAATTCCGC 
AGCAGCGTGC TCGAGCCGAC CCAGGCCGAA CTCGGCCGCC TGGCCGTGGG CATGGCCAGC 
ACCTTCAATG CCGGCCACCG CCAGGGTATG GATCTGTATG GCGCGATGGG CGGCAACTTC 
TTCAACATCG GTTCGCCGAC CACTGCCGCC AACCCCAGCA ACACCGGCAG CGCATCGCTG 
AGCGCCAGTT TCAGCAATAT GAGCGCGGTG GACGGCCAGA ACGTCACGCT GAGTTTCGAC 
GGCACCAATT GGAAGGCGAC CAACGCCAGT ACTGGCTCTG CGGTGCCGAT GACCGGCACC 
GGCACCGCGG CCAACCCGCT GGTGCTCAAT GGCGTCAGCA TGGTGGTGGG TGGCACCCCG 
GCGAGCGGCG ACAAGTTCCT GCTGCAGCCC ACCGCCGGGC TGGCTGGCAG CCTGTCGGTC 
GCCATTACCG ATCCCTCGCG CATTGCTGCG GCCACCCCGG TCAAGGCCAC CGCGACGCTC 
GCCAACCAGG GCAGTGGCAA GATCAGCGAC GTCAAGGTCA CCAATGCGCA GAACCCGGCG 
CTGCTGACCC CGTCGTCGGT CGAGTTCATC GACGCCAACC AGTACACCAT CGATGGTGCC 
GGCCCGTTCG CCTACACCGC CGGGCAGACC ATCAGCGCCA ACGGCTGGAG CTTCGCGCTG 
GACGGCGCGC CCAAGGCCGG CGACACCTTC GGCGTCGGGC CGACCGGCGC CGGCTCCAGC 
GACAACGGCA ATGCCAAATT GCTGGCCAAG ATCGACGACG CCAAGGCGCT CAGCGGTGGC 
ACGGTCACGC TCAACGGCGC GCTGTCGGGC CTGACCACGT CGGTGGGTTC GGCCGCGCGC 
GCAGCCAATT ATTCGGCCGA TGCGCAGAAG GTCATCAACG ACCAGGCGCA GGCCAGCCGC 
GATTCGATTT CCGGCGTCAA CCTCGATGAG GAAGCCGCCA ACATGCTGAA ACTGCAGCAG 
GCCTACCAGG CCGCCGCACA GATGATTTCC ACCGCCGACA CCATGTTCCA AGCCATCCTG 
GGTGCCGTAC GCTGA 

 

Protein sequence

MSIMSTGTSA LIAFQRALST VSHNVANINT EGYSRQRVEF ATRTPTDMGY AFVGNGAKIT 
DVGRVADQLA ISRLLDSGGE LSRLQQLSSL SNRVDALYSN TATNVAGLWS NFFDSTSAVS 
SNASSTAERQ SMLDSGNSLA TRFKQLNGQM DGLSNEVNSG LTSSVDEVNR LTQQIAKLNG 
TIGSSAQNAA PDMLDQRDAL VSKLVGYTGG TAVMQDGGFI NVFTAGGQAL VVATTSSKLT 
TVADPYQPTK LQVAMQTQGQ NVSLSANSLG GQIGGLLEFR SSVLEPTQAE LGRLAVGMAS 
TFNAGHRQGM DLYGAMGGNF FNIGSPTTAA NPSNTGSASL SASFSNMSAV DGQNVTLSFD 
GTNWKATNAS TGSAVPMTGT GTAANPLVLN GVSMVVGGTP ASGDKFLLQP TAGLAGSLSV 
AITDPSRIAA ATPVKATATL ANQGSGKISD VKVTNAQNPA LLTPSSVEFI DANQYTIDGA 
GPFAYTAGQT ISANGWSFAL DGAPKAGDTF GVGPTGAGSS DNGNAKLLAK IDDAKALSGG 
TVTLNGALSG LTTSVGSAAR AANYSADAQK VINDQAQASR DSISGVNLDE EAANMLKLQQ 
AYQAAAQMIS TADTMFQAIL GAVR