Gene PXO_01002 details

Gene Information

• Locus tag: PXO_01002
• Symbol: flgL
• ID: 6306069
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: +
• Start bp: 2603936
• End bp: 2605141
• Gene Length: 1206 bp
• Protein Length: 401 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 642639832
• Product: flagellar hook-associated protein FlgL
• Protein accession: YP_001913692
• Protein GI: 188576763
• COG category: [N] Cell motility
• COG ID: [COG1344] Flagellin and related hook-associated proteins
• TIGRFAM ID: [TIGR02550] flagellar hook-associated protein 3

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.0789594
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGACC GTATCTCTAC CAGCATGATG TACAGCCAAT CGGTGGCCTC GATGGGCGCC 
AAGCAGGCGC GGCTGAACCA GATCGAGGCC CAACTCGGCA GTGGGCAGCG CTTGGTCACG 
GCCAAGGACG ACCCGGTCGC CGCAGGCACC GCGGTCGGTC TGGATCGCGC CCTGGCGGCA 
ATCACGCGTT TCGGCGAAAA CGCCAACAAC GTGCAGAACC GCCTCGGGCT GCAGGAAAAT 
GCGCTGTCGC AGGCCGGCGA CAAAATGGCG CGCGTCACCG AATTGGCGGT GCAGGCCAAC 
AATTCCTCGC TCAGCCCCGA CGACCGCAAG GCGATCGCCG CGGAGCTGAC CGCCCTGCGC 
GACAGCATGG TGAGCCTGGC CAACAGCACC GATGGCACCG GCCGCTATCT GTTCGGCGGC 
ACTGCCGACG GCAGCGCGCC TTTCATCAAG AGCAGTGGCA ATGTCACCTA CAACGGCGAC 
CAGACCCAGA AGCAGGTCGA AGTGGCGCCG GACACCTTTG TCAGCGACAC CCTGCCCGGC 
AGCGAAATCT TCATGCGCAT CCGCACCGGC GACGGCACCG TGGACGCGCA CGCCAACGCC 
GCCAACACCG GGACCGGGCT GCTGCTGGAT TTCAGCCGCG ATATCAGTAC CGGCAGTTGG 
AACGGCGCCA GCTACAGCGT GCAGTTCACC GCCGCCAACA CCTATGAAGT GCGCGACAGC 
ACCAATGCGG TTGTCAGCAC CGGCACCTAT AAAGAGGGCC AAGACATCAA CGCAGCCGGC 
GTGCGCATGC GCATCAGCGG CGCGCCGGCG GTCGGCGACA GTTTCCAGAT CGGCGCTTCC 
GGCAGCAAGG ACGTGTTTTC CACCATCGAC GACATGGTCG GCGCGCTGAA CTCAGACACG 
CTGACCGCCC CGCAGAAGGC ATCGATGATC AACACCTTGC AGTCGTCCAT GCGCGACATC 
GCGCAGGCGT CGTCGAAGAT GATCGATGCG CGCGCCTCCG GTGGCGCGCA GTTGTCGGCA 
ATCGACAACG CCAACTCCTT GCTCGAATCC AACGAAGTCA CGCTCAAGAC CACCCTGTCG 
TCGATCCGCG ATCTGGATTA CGCCTCGGCG ATTGGGCAGT ACCAACTCGA GAAGGCCTCG 
TTGCAGGCCG CTCAAACGAT TTTTCAGCAG ATGCAGTCGT CGTCGTTGTT CAACCTGATC 
CGCTGA 

 

Protein sequence

MTDRISTSMM YSQSVASMGA KQARLNQIEA QLGSGQRLVT AKDDPVAAGT AVGLDRALAA 
ITRFGENANN VQNRLGLQEN ALSQAGDKMA RVTELAVQAN NSSLSPDDRK AIAAELTALR 
DSMVSLANST DGTGRYLFGG TADGSAPFIK SSGNVTYNGD QTQKQVEVAP DTFVSDTLPG 
SEIFMRIRTG DGTVDAHANA ANTGTGLLLD FSRDISTGSW NGASYSVQFT AANTYEVRDS 
TNAVVSTGTY KEGQDINAAG VRMRISGAPA VGDSFQIGAS GSKDVFSTID DMVGALNSDT 
LTAPQKASMI NTLQSSMRDI AQASSKMIDA RASGGAQLSA IDNANSLLES NEVTLKTTLS 
SIRDLDYASA IGQYQLEKAS LQAAQTIFQQ MQSSSLFNLI R