Gene PXO_01001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_01001 
Symbol 
ID6306070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp2605488 
End bp2606660 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content64% 
IMG OID642639833 
Productflagellin 
Protein accessionYP_001913693 
Protein GI188576764 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.157876 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCTGA ACGCTCAGCG TAACCTCAAC ACCAACAGCT CCAGCTTGGC GCTGAGCATC 
CAGCAGCTTT CGTCGGGCAA GCGCATCACC AGCTTTGCCG TAGACGCAGC CGGCGGCGCA
ATCGCCGAGC GTTTCACTAC CCAGATCCGC GGCCTGGACG TTGCCTCGCG CAACGCCAAC
GACGGCATCT CGCTGTCCCA GACCGCCGAA GGCGCGATGC AGGAAATCGG CAACAACCTG
CAGCGTATCC GCGAACTGTC AGTGCAGTCC GCAAATGCAA CCAACTCGTC CACCGACCGC
GAAGCGCTGA ACTCCGAAGT CAAGCAGCTC ACCTCCGAAA TCGACCGGGT CGCCAATCAG
ACCAGCTTCA ACGGCACCAA GCTGCTTGAC GGCTCCTTCT CTGGCGCGCT GTTCCAGGTC
GGCGCCGACG CCGGCCAGAC CATCGGCATC AACAGCATCG CCGACGCCAA CATCGATACG
CTGGGCAGGG CCAACTTCGC CGCCGCCGTT TCCGCCGCTG GCGTCAGCGG CACCGCCACC
GCTTCCGGTT CGGTCAGCGG CATCAGCCTG TCGTTCAAGG ATGCCAGCGG TTCGGCCAAG
AGCATCACCA TCGCTGACGT CAAGGTCGGC GCCGGCGACA CCGCTGCCGA CGTCAACAAG
AAGGTTGCCT CGGCGATCAA CGACAAGCTC GACCAGACCG GTATGTACGC CTCGATCAAG
AGCGATGGCT CGGTGCAGAT CGAATCGCTG AAGGCTGGCC AGGACTTCAC CTCGCTGTCG
GCTGGTACCT CCAGCGCTGC TGGCATCACC GTCGGCGCCG GCATCACCAC CGCTTCGGCC
GCTTCGGGCT CCACCGCTTC GACCTTGGGC AGCCTGGATA TCTCCACGTT CTCGGGCGCA
CAGCAAGCAC TGGAAATCGT CGACAAGGCG CTGACCACGG TCAACTCCTC GCGCGCCGAT
ATGGGTGCGG TGCAGAACCG CTTCACCTCC ACCATCGCCA ACCTGAGCGC AACCTCGGAA
AACCTGTCGG CCTCACGTAG CCGGATCGCC GATACCGACT ACGCCAAGAG CACCGCCGAA
CTGACCCGCA CGCAGATCCT GCAGCAGGCC GGTACTGCGA TGCTGGCCCA GGCCAAGTCG
GTTCCGCAGA ACGTGCTGAG CCTGCTGCAG TAA
 
Protein sequence
MSLNAQRNLN TNSSSLALSI QQLSSGKRIT SFAVDAAGGA IAERFTTQIR GLDVASRNAN 
DGISLSQTAE GAMQEIGNNL QRIRELSVQS ANATNSSTDR EALNSEVKQL TSEIDRVANQ
TSFNGTKLLD GSFSGALFQV GADAGQTIGI NSIADANIDT LGRANFAAAV SAAGVSGTAT
ASGSVSGISL SFKDASGSAK SITIADVKVG AGDTAADVNK KVASAINDKL DQTGMYASIK
SDGSVQIESL KAGQDFTSLS AGTSSAAGIT VGAGITTASA ASGSTASTLG SLDISTFSGA
QQALEIVDKA LTTVNSSRAD MGAVQNRFTS TIANLSATSE NLSASRSRIA DTDYAKSTAE
LTRTQILQQA GTAMLAQAKS VPQNVLSLLQ