| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00983 |
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| Symbol | |
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| ID | 6306088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 2622065 |
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| End bp | 2625562 |
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| Gene Length | 3498 bp |
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| Protein Length | 1165 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642639851 |
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| Product | O-antigen biosynthesis protein |
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| Protein accession | YP_001913711 |
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| Protein GI | 188576782 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1216] Predicted glycosyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGCCT ACAAGCTGCG CTATCTCGAT GAGGCGCTTA CGAGCGTAGT TCTGCAGTCT
TACCCCAGGC TCGAGCTGAT CGTCTGCGAC GACAGTGCCG ATGCCTTGAT CGAACAGCGC
GTCGCAAGGC ATTCGCTGCA ATGCCGTTTT CCGATCCGCT ATTTCCGCAA TCCAGCTCGC
CTGGGCGAGC TCGGCAGCAA AATCAAAGGG ATCACCCTGG CACAGGGCGA GTACGTCAAG
TTCCTGCACG ATGACGATGT GCTGCAGCCC GATTGCATTG CGCAGCTGGT GGAAGCGATC
GAGCGTAATC CGGGCACGGC GATGGCCTCC TCGCGGCGGA TACGCATCGA TGACGACGGG
CAGCCGTTGC CGGACATCCT GGCCACATGC TTCCCATTCG CCGACGACGT GCTGATCGAC
GGGCCGGAGC TGGTGTCGTT TCTGGCCGAC CACACCATCA ATTTCATCGG TGAGCCGAGT
TGCGTGCTGG CACGACGCGC GGATCTGTTG GCGTTGGGCA ACGCGTTGAT GGCGTTGAAT
GGCAAGGCCA TCCACTGGGT CGGCGATCTG GCGATCTACG TCAAGCTGCT GCGCCACGGC
AACCTGGCGA TGCTGGCCAG CCCGCTGACC CAGTTCCGTG TCTCGAGTGC GCAGTTCAGT
CAGAGTGGTC GCGATCAGCC CGGCATCGGC GATCAGGGCC ATGAAGACTT GCGCCAGGGC
ATCCGGCAGC TCGGTTGGCG ACGCGAGACT GGCGACAACC GACTGGTGCG GGTGGCACCG
CTCAGTCCGC ACAAGGCACG CGTGTTCAAG CCGGTGGATC TGGTCAATGC GTTGATGCAA
AGCGCGGGTA TGGCCGAGCG CGTGTCGCCG GCTACCTGGT TGGGTGTGCG TCATCCGAAC
ACAGTGCAGC GTGCGTTGAT CGAAGCGCGC CTGCAGGCGC ATGCCGGTGG CCCGCGCATT
GCGGTATTGC TGATCGACCG TCACGGCGAT GCCGCGGGGG TGGCAGCAAC GCGGGCCAGC
CTGGATGCGG TGGCCTGCTA TCAACACCAT CACACCTGGG TCATCAGCAG CTCGCCGCAG
CAGGTTGCCG AATCCGGTGA GCGCGGCGTG CTGATCGACG AACAAGACTT GGCGGCAACA
CTCAACCGAG TGATCACCTC ACAGGACGCG ATCGATTGGG TGCTGCTGGT CGATGCCGGC
AGCCTGTTCA CCGCCAGCGG TTTGCTGATG CTGGCACTGG AAATGCTCGC GCTACCGGAC
GACTGCCAGG CTATCTACGC CGATGAAGTG ATGGCGCTGG ACAACGGCCA GCTGGGGCTG
GCGCTGCGGC CGGCGCTGTA TCTGGACATG CTGTTGAGCG CACCTGCGAC GTTGTCGCGG
CACTGGGTGT TCCGGCAGCG CACGCTGCTG GTCGATGGCG GCTTCCCCAC CGGGCCCAGC
GCGGCATTCG AACTGGATTA CCAGCTGTGC CTGGTCGAGC GTTACGGGCT GGCCTGCATT
CGACATATCG CTGAGCCATT GCTGATTGCA TCGGCCACGC CGCAGCATGC CGACGAAGAC
GAGCGGCAGG CGATTGCGCG TCATCTCGCC GAACGCGGCT ACGTGGACGC CGCGGTGCAC
AGCACCGGGC CCGGCCGGCA CGCGGTGGAC TACCGCCATG CGCAGCAGCC GCTGGTGAGC
ATTCTGGTGC TGGTCGATGG CCGCTTGCCG CAGGTGCAGC GCTGCCTCGA AAGCATTCTC
GCCAACACCG CTTACCCGCA TTACGAGGTG CTCCTGCTGG ATCGTGGCAC CACTGCGCCA
GACCTGCGCG ACTGGCTGAC CGGCATCGAT ACCCTCGGCA TGCAGCAGAT CCGCGTGCTG
CGCTTTGCCG GCGAACCGTC GCGCGAAGCG GTGTGCAATG CCGCCGCCGA ACACGCGCGT
GGGGACATGT TGTTGTGGCT GGCGGCAGGC GCCGCGGTGA TGAAGGCCGA TTGGCTGGAG
CAGTTGCTCA ACCATGCGCT GCGCCCGGAG GTCGGTGCGG TAGCCGGCAA GTTGCTGCGC
GGCGATGGCA CGGTGCACCA CGCCGGCCTG CTGCTGGGCC TGGGGGCACC GGCAACGCGC
GCGTTCGAAG GCGCGGCATT CGACGAATCG GGTTATCTGC AGCGCCTGCA ACTGGATCAA
AACTACAGCG CGTTGAGCGG CGAATGCCTG ATGTTGCCGC GTCAGCTGTT TATGGACGCC
GGTGGCTTCG AACTGGAGCC GGCGCTGGCG CAGTGGAGCG ATGTCGATCT GTGCCTGCGC
TTGCAGCAAG CGGGCTACCT CAATGTCTTC GCAGCGCATG CGCAGTTGTT GATCGACCCG
CTCGAGGCAA CACCCGTCAC CGCGCTGGAC GAAGACGCGA TGTACGCGCG GTGGCTGCCG
GTGATGGCCA ACGACCCTGC CTACAACCCG GGCTTTTCGT TGGACCCGGG CGCCGGCTTC
GCGTTGGCCG ACCCACGCGC GAGCTGGCGT CCATTGCAGT CATGGCGGCC GCTGCCGAGC
GTGATCGCGT TGCCGGCCGA TATCGAAGGC TGCGGCCACT ACCGGGTGAT CCAGCCGCTA
CGCGCCCTTC GGGAAGCTGG ACTCGCCGAA GGAGTGCTGT TCAACGGCTA CCTGGAGATC
AGCGAACTGG CGCGTCAGGA TCCCGATGTG GTGATCCTGC AGCGCCAGGT CGGCGAGGCG
CGACTGGAGG CGATGCGGCG GATGAAGGCG CTGTCGCGCG CGTTCAAGGT GTACGAGCTG
GACGATTACC TGCCCAATTT GCCGTTGAAG AATGCGCACC GCGAGCACAT GCCCAAGGAC
ATTCTCAAAA CGGTGCGGCG TGGTCTTAGC ATGGTGGACC GTTTTGTCGT GTCCACTCCG
GCGCTGGCCG AGGCGTTCGC CGGGTTGCAC AGCGATATCC GGGTGGCCGA AAACCGCTTG
CCGCCCCATT GGTGGGACCA GTTGCCGGCG AGAGGCGAGC GCCAGTGTGG CAAGCCGCGG
ATTGGTTGGG CCGGCGGGGC CAGCCATACC GGCGATCTGG AACTGATCGC CGACGTGGTG
CGCGAGCTGG CCGATGAAGT TGAGTGGGTG TTCATGGGGA TGTACCCGTT CGCGCTGCGC
CAGCACATCC ACCACTTTCA GCCAGGCGTG CTGATCGATC ACTACCCGGC GGCGCTGGCG
GCGTTGGATC TGGACCTGGC GCTCGCACCG GTGGAGCAAA ACCTGTTCAA CGAGTGCAAG
AGCAACTTGC GCCTGCTCGA ATACGGTGCC TGCGGTTATC CGGTCATCGC CAGCGACGTG
CGCTGCTACC AGGGCACCCT GCCGGTGACG TTGGTGAAGA ACCGCTACCG CGACTGGATC
GGGGCCATCC GCGAGCACTT GGCCGACCTG GATGCGACCC GCGCCAAGGG CGCCGCCCTG
CGCGAGGTGG TGCGGCGCGA CTGGATGCTC AGCGGCAGCA ATCTGGAGCG CTGGCGGGAG
GCGTGGTTGC CGGACTGA
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| Protein sequence | MPAYKLRYLD EALTSVVLQS YPRLELIVCD DSADALIEQR VARHSLQCRF PIRYFRNPAR
LGELGSKIKG ITLAQGEYVK FLHDDDVLQP DCIAQLVEAI ERNPGTAMAS SRRIRIDDDG
QPLPDILATC FPFADDVLID GPELVSFLAD HTINFIGEPS CVLARRADLL ALGNALMALN
GKAIHWVGDL AIYVKLLRHG NLAMLASPLT QFRVSSAQFS QSGRDQPGIG DQGHEDLRQG
IRQLGWRRET GDNRLVRVAP LSPHKARVFK PVDLVNALMQ SAGMAERVSP ATWLGVRHPN
TVQRALIEAR LQAHAGGPRI AVLLIDRHGD AAGVAATRAS LDAVACYQHH HTWVISSSPQ
QVAESGERGV LIDEQDLAAT LNRVITSQDA IDWVLLVDAG SLFTASGLLM LALEMLALPD
DCQAIYADEV MALDNGQLGL ALRPALYLDM LLSAPATLSR HWVFRQRTLL VDGGFPTGPS
AAFELDYQLC LVERYGLACI RHIAEPLLIA SATPQHADED ERQAIARHLA ERGYVDAAVH
STGPGRHAVD YRHAQQPLVS ILVLVDGRLP QVQRCLESIL ANTAYPHYEV LLLDRGTTAP
DLRDWLTGID TLGMQQIRVL RFAGEPSREA VCNAAAEHAR GDMLLWLAAG AAVMKADWLE
QLLNHALRPE VGAVAGKLLR GDGTVHHAGL LLGLGAPATR AFEGAAFDES GYLQRLQLDQ
NYSALSGECL MLPRQLFMDA GGFELEPALA QWSDVDLCLR LQQAGYLNVF AAHAQLLIDP
LEATPVTALD EDAMYARWLP VMANDPAYNP GFSLDPGAGF ALADPRASWR PLQSWRPLPS
VIALPADIEG CGHYRVIQPL RALREAGLAE GVLFNGYLEI SELARQDPDV VILQRQVGEA
RLEAMRRMKA LSRAFKVYEL DDYLPNLPLK NAHREHMPKD ILKTVRRGLS MVDRFVVSTP
ALAEAFAGLH SDIRVAENRL PPHWWDQLPA RGERQCGKPR IGWAGGASHT GDLELIADVV
RELADEVEWV FMGMYPFALR QHIHHFQPGV LIDHYPAALA ALDLDLALAP VEQNLFNECK
SNLRLLEYGA CGYPVIASDV RCYQGTLPVT LVKNRYRDWI GAIREHLADL DATRAKGAAL
REVVRRDWML SGSNLERWRE AWLPD
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