| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00964 |
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| Symbol | |
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| ID | 6306107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 2644732 |
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| End bp | 2646822 |
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| Gene Length | 2091 bp |
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| Protein Length | 696 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642639870 |
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| Product | Putative signal protein with GGDEF and EAL domains |
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| Protein accession | YP_001913730 |
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| Protein GI | 188576801 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0651645 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTCGGAA CCTACAACCT TGGCATGGTG ATGCTGTCAC TGGTGGTGGC CGTGTTGGCC
TTCTATACCG CGCTGCCGCT AGTCGCATGG ATGACTGCCA GCCGTGTCGG CTTCGCAGCC
GCGTGGCTGT CCGGCGGCGC CATTGCCATG GGTATTGGCA TCTGGTCGAT GCACTTCATC
GGCATGCTGG CGTTCCGCCT GCCGATTCCG GTGGGCTATG ACCTGGCGTT GACGGTCTAT
TCGATGCTCG TGGCGATTCT GACCTCCGCG CTAGCGCTCT GGTTGACCTC ACGCGCGGAT
TTGTCCGTGC CACGGCTGGG CCTGGGTGCG CTGCTGATGG GGCTGGTCAT TGCGCTGATG
CATTACATGG GCATGGGCGC GCTGTGCATG GTCAAGGCGA TCAGCTATGA CCCACTGCTG
TTCGGGCTCT CGATCGCCAT CGCCATCGCC ATCGTCGCCT CTGCCGCTGC GTTATGGATC
GTCTTCCGGC TGCGCCACGA CGGGCATCGC TACAGTCTGC GCATGATCGC CGCCGTGATC
ATGGGCGTGG CGATCGTGGG CATGCATTAC ACCGACATGG CCGCCGCGCG GTTCGCACCC
GGCAGTTTGT GTGGAGTCGA GGCCGATACG CAGCTGCCAT TGTCGTGGCT GGCGGCAGTG
GTGCTGGTGA CCCTGGCCTT GCTGATACTG GCGCTGGTCA TTTCGGTGCT GTCGCGCCGT
TTTCAGCAGC GTACCGACGT GCTGATGCAA TCGCTGGCCA AGGCCAATGC TGACCTGACC
CTGGCGGCGC TACACGATCC ACTCACCCGA CTGCCCAACC GCGTGCTGCT GCACGAGCAT
CTCCTGCAGA ACATCGAACG CGCCCAGCGC CAGGGGCAGC GCTTTGCGGT GATGCTGATC
AACCTGGACG GCTTCAAGGT GATCAACGAC GGCTACGGCC ATCAGCTGGG CGACCGCCTG
CTGGTGGTGG TGGCCGAACG TTTGAACGCG CATCGGCGCG CGCATGGCAG CCTGGCACGG
CTGGGTGCGG ACGAGTTCGT GCTGGTGGCC GACATTGCAG ACCCGGGAGA TGCCGCCGCA
CTCGCCGCGC ATCTGGTGCA GGCACTGGCG GTGCCGTTCA TGGTTTCCAA CCACGAGTTG
CGTCTGAGCA GCAGCCTTGG CATCGCACAG TACCCGGAAG ACGCCACCAG CGGTCCCCAG
CTCCTGACGC ATGCCGACGC GGCGATGAAC CACGCCAAGC ACGCGGGCCG CAACCGCTAC
AGCTTTTTCG AACGCTCGAT GACGGCCACC ACCCGCGAAC GCCTGCAGTT GCTGCACGAA
CTGCCGCGCG CGCTGGAGCT GGGCCAGTTC GTGCTGCATT ACCAGCCCAA ATACTGCGCC
GAGGATGGCC GCCCGATCGG CGCCGAAGCG CTGATCCGCT GGCAGCATCC CGAACGCGGC
CTGGTGCCGC CGGACAGCTT CATCCCGCTG GCCGAACGCA GCGGCATGAT CGGCCTGCTC
GGCAGCTGGG TGCTGCGGCA GGCCTGCCGC CAGATGCACG ACTGGCGCGC GGCCGGGCAC
GGCGACTGGC GGGTGGCGGT CAATCTGTCG GCGATCCAGC TGGCCTCGCC CAGCTTGCTG
GACGAAGTGG CCACCACGCT CAGCGAGTTC ATGCTGGCAC CGGGCCAGCT CACCCTGGAA
ATCACCGAAA CCATGGCCAT GCGCGATGCC GAGGCCTGCC TGCGCACCCT CGGACAGCTC
AACGCACTGG GCGTGCGCAT CGCCATCGAC GACTTCGGCA CCGGCTATTC CAACCTGCTT
TATCTGCGCA AGCTGCCGGC GCACGAGCTC AAGATCGACC GCAGTTTTGT GCAGGCCATG
GACAGCAGTG CCGAAGACAT CGCCATCGTG GCCGCCGTGG TGGCACTGGC CCACACCATG
CGTCTGCAGG TAGTCGCCGA AGGCGTGGAA ACCATCGCCC AGCGCAACAC CCTGGAACGG
CTGGGCTGCG ACCAACTGCA AGGCTATCTG CTGGGCCGCC CGATGGACGC CGAACGCTTC
ATCGCCACCG TGGTCGCCCA GCGCAACGGC CCGCGCCGCC TGGCTCGCTG A
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| Protein sequence | MVGTYNLGMV MLSLVVAVLA FYTALPLVAW MTASRVGFAA AWLSGGAIAM GIGIWSMHFI
GMLAFRLPIP VGYDLALTVY SMLVAILTSA LALWLTSRAD LSVPRLGLGA LLMGLVIALM
HYMGMGALCM VKAISYDPLL FGLSIAIAIA IVASAAALWI VFRLRHDGHR YSLRMIAAVI
MGVAIVGMHY TDMAAARFAP GSLCGVEADT QLPLSWLAAV VLVTLALLIL ALVISVLSRR
FQQRTDVLMQ SLAKANADLT LAALHDPLTR LPNRVLLHEH LLQNIERAQR QGQRFAVMLI
NLDGFKVIND GYGHQLGDRL LVVVAERLNA HRRAHGSLAR LGADEFVLVA DIADPGDAAA
LAAHLVQALA VPFMVSNHEL RLSSSLGIAQ YPEDATSGPQ LLTHADAAMN HAKHAGRNRY
SFFERSMTAT TRERLQLLHE LPRALELGQF VLHYQPKYCA EDGRPIGAEA LIRWQHPERG
LVPPDSFIPL AERSGMIGLL GSWVLRQACR QMHDWRAAGH GDWRVAVNLS AIQLASPSLL
DEVATTLSEF MLAPGQLTLE ITETMAMRDA EACLRTLGQL NALGVRIAID DFGTGYSNLL
YLRKLPAHEL KIDRSFVQAM DSSAEDIAIV AAVVALAHTM RLQVVAEGVE TIAQRNTLER
LGCDQLQGYL LGRPMDAERF IATVVAQRNG PRRLAR
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