Gene PXO_00959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_00959 
SymbolflhF 
ID6306111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp2650894 
End bp2652549 
Gene Length1656 bp 
Protein Length551 aa 
Translation table11 
GC content70% 
IMG OID642639874 
Productflagellar biosynthesis regulator FlhF 
Protein accessionYP_001913734 
Protein GI188576805 
COG category[N] Cell motility 
COG ID[COG1419] Flagellar GTP-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.136085 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCACCG CCTTCCGCAT GGTGCGTGAA GAACACGGCC CGGACGCAGT GATCCTGTCC 
AACCGCCGTA CCGCCGAAGG CATCGAGATC GTCGCTGCCA GCAACTACGA CGAAGAACTC
GTGCAGCGCG CCCTGGAAAC CGCGCGCTCC GAGACGTCGG CCGCCGCACA TAATGCGGCG
GCCCCCATCC AGCAGGCGCC TGCCCCGCAA GCCCCGACCA AGCCTGCCGC GCCGGTGCAT
GCCCCGCTCA AGCTGGCTGC CAACGCCAAC GTGAGCCAGC GCCAGCGCGT TGCCAACGCC
GCTGAAGACA TGATCGCCGC CATGGCGCTG CGTCAGCCGG TCAACGTGCC GCGCCAGGCG
CCGGCCGCCG CACCGGTGCG CACCGCATCC ATCCCCTCGC CGGCCGCCCA GGCATTGGCG
CACGCGGTGG CCGTCACCAC CGCACCGCGC CAGGAACACG CGCTGTCGGC CGTGCCGGAA
CAGCTGTTCG CCGACTTTTT GACCACCGCT CCGATGCAGG CTCCGGTGCA GGCTCCGGTC
CACGCTGCCC CGGTGCAGGC ACGCACGCCG ATCATGGCCG CCGCGCTTGC CACCCACGCC
TCTTACGGGC AGGACGACGA CGAGCAGGAC GACGACGGCT TCGACATGGA CGACGCGCTG
CCGCAGATCC TGCCGCCGGC CGCGCTGCCG CCGATCGTGG TCGCCCCGGC CGCCGTGGCG
GTCGCTGCTG CCGCTCCGGC GCCGCAGAAC GACGAAGAAC TCAAGCAGCT GCGCGGTGAG
CTGGCGCTGA TGCGGCAGAT GATCGAGCGC GAAATGAACC GCCTCACCGA CGAGCGCCTG
CGTGGCTCAC CGGCGCGTGC GCAGGCGCTG GAGCTGATGG ACGACTACGG CTTCGATGCC
GGCTTGACCC GCGATGTCGC CATGCAGATC CCGGCCGATA CCGAATTGCA CCGTGGCCGC
GGCCTGATGC TGGGCCTGCT GTCCAAGCGT CTGCCGGTGG CCCCGGTCGA CCCGCTGGAA
CGCGGCGGCG TGATCGCGTT GGTCGGCCCG ACCGGCGCCG GCAAGACCAC CACCATTGCC
AAACTCGCCC AGCGCTTCGC CGCACAGCAC ACTCCGCGCG ACGTGGCCCT GGTCACCACC
GACACCCAGC GCGTCGGCGG CCGCGAGCAG CTGCACAGCT ACGGCCGTCA GCTCGGCATC
GCGGTGCACG AAGCCGACAG CGCCGAAAGC CTGCTTGACC TGTTCGAGCG CCTGCGCGAC
TACAAGCTGG TGCTGATCGA CACCGCCGGC ATGGGCCAGC GCGACCGCGC CCTGGCCGCC
CAGCTGAACT GGCTGCGCGC CGCCCAGCAG GTCACCTCGC TGCTGGTGCT GCCTGCCAAC
GCCCATTTTT CCGACCTCGA CGAGGTCGTA CGCCGCTTCG CCCACGCCAA ACCCCAAGGC
GTGGTGCTGA CCAAACTCGA CGAGACCGGC AGCTTCGGCA GCGCCTTGTC GGTGGTGGTC
GACCACCAAA TGCCCATCAC CTGGGTGACT GACGGACAGC GGGTCCCCGA CGACCTGCAC
CGCGCCAATG CCGCCAGTCT CGTTCTTCGC CTTGAAGATT TGCGGCGCGC TGCCGATAAG
CCCTGTACTC CGGAGCACAA CCATGCAGTC GCGTGA
 
Protein sequence
MRTAFRMVRE EHGPDAVILS NRRTAEGIEI VAASNYDEEL VQRALETARS ETSAAAHNAA 
APIQQAPAPQ APTKPAAPVH APLKLAANAN VSQRQRVANA AEDMIAAMAL RQPVNVPRQA
PAAAPVRTAS IPSPAAQALA HAVAVTTAPR QEHALSAVPE QLFADFLTTA PMQAPVQAPV
HAAPVQARTP IMAAALATHA SYGQDDDEQD DDGFDMDDAL PQILPPAALP PIVVAPAAVA
VAAAAPAPQN DEELKQLRGE LALMRQMIER EMNRLTDERL RGSPARAQAL ELMDDYGFDA
GLTRDVAMQI PADTELHRGR GLMLGLLSKR LPVAPVDPLE RGGVIALVGP TGAGKTTTIA
KLAQRFAAQH TPRDVALVTT DTQRVGGREQ LHSYGRQLGI AVHEADSAES LLDLFERLRD
YKLVLIDTAG MGQRDRALAA QLNWLRAAQQ VTSLLVLPAN AHFSDLDEVV RRFAHAKPQG
VVLTKLDETG SFGSALSVVV DHQMPITWVT DGQRVPDDLH RANAASLVLR LEDLRRAADK
PCTPEHNHAV A